RNA–Protein interactions for RNA: ENST00000525106.1

C11orf58-205, Transcript of chromosome 11 open reading frame 58, humanhuman

TSL 2

Gene C11orf58, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf58-205ENST00000525106 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
C11orf58-205ENST00000525106 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
C11orf58-205ENST00000525106 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
C11orf58-205ENST00000525106 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
C11orf58-205ENST00000525106 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
C11orf58-205ENST00000525106 FOXD1Q16676 465 aa21.91■■□□□ 1.1
C11orf58-205ENST00000525106 ADRA2BP18089 450 aa21.2■□□□□ 0.98
C11orf58-205ENST00000525106 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
C11orf58-205ENST00000525106 PIAS4Q8N2W9 510 aaPredicted RBP20.73■□□□□ 0.91
C11orf58-205ENST00000525106 MSH5O43196 834 aa20.17■□□□□ 0.82
C11orf58-205ENST00000525106 PPP4R3CPQ6ZMV5 832 aa19.68■□□□□ 0.74
C11orf58-205ENST00000525106 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
C11orf58-205ENST00000525106 KCNA4P22459 653 aa19.38■□□□□ 0.69
C11orf58-205ENST00000525106 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
C11orf58-205ENST00000525106 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
C11orf58-205ENST00000525106 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
C11orf58-205ENST00000525106 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
C11orf58-205ENST00000525106 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
C11orf58-205ENST00000525106 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
C11orf58-205ENST00000525106 HOXD11P31277 338 aaPredicted RBP18.55■□□□□ 0.56
C11orf58-205ENST00000525106 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
C11orf58-205ENST00000525106 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
C11orf58-205ENST00000525106 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
C11orf58-205ENST00000525106 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
C11orf58-205ENST00000525106 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
C11orf58-205ENST00000525106 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
C11orf58-205ENST00000525106 ZBTB22O15209 634 aa17.81■□□□□ 0.44
C11orf58-205ENST00000525106 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
C11orf58-205ENST00000525106 FOXD4L1Q9NU39 408 aa17.81■□□□□ 0.44
C11orf58-205ENST00000525106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.432e-9■■■□□ 15.1
C11orf58-205ENST00000525106 MYCNP04198 464 aaPredicted RBP17.49■□□□□ 0.39
C11orf58-205ENST00000525106 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
C11orf58-205ENST00000525106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
C11orf58-205ENST00000525106 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
C11orf58-205ENST00000525106 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
C11orf58-205ENST00000525106 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
C11orf58-205ENST00000525106 ATXN8OSP0DMR3 200 aa17.15■□□□□ 0.34
C11orf58-205ENST00000525106 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
C11orf58-205ENST00000525106 APLP2Q06481 763 aa17.08■□□□□ 0.32
C11orf58-205ENST00000525106 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
C11orf58-205ENST00000525106 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
C11orf58-205ENST00000525106 CAPN15O75808 1086 aa16.86■□□□□ 0.29
C11orf58-205ENST00000525106 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
C11orf58-205ENST00000525106 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
C11orf58-205ENST00000525106 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
C11orf58-205ENST00000525106 POLA2Q14181 598 aa16.56■□□□□ 0.24
C11orf58-205ENST00000525106 ABCB7O75027 752 aa16.54■□□□□ 0.24
C11orf58-205ENST00000525106 DSG3P32926 999 aa16.5■□□□□ 0.23
C11orf58-205ENST00000525106 FBLN2P98095 1184 aa16.31■□□□□ 0.2
C11orf58-205ENST00000525106 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
C11orf58-205ENST00000525106 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
C11orf58-205ENST00000525106 FKBP8Q14318 412 aa16.17■□□□□ 0.18
C11orf58-205ENST00000525106 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
C11orf58-205ENST00000525106 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
C11orf58-205ENST00000525106 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
C11orf58-205ENST00000525106 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
C11orf58-205ENST00000525106 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
C11orf58-205ENST00000525106 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
C11orf58-205ENST00000525106 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
C11orf58-205ENST00000525106 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
C11orf58-205ENST00000525106 PROM2Q8N271 834 aa15.69■□□□□ 0.1
C11orf58-205ENST00000525106 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
C11orf58-205ENST00000525106 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
C11orf58-205ENST00000525106 FBXO3Q9UK99 471 aa15.56■□□□□ 0.08
C11orf58-205ENST00000525106 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
C11orf58-205ENST00000525106 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
C11orf58-205ENST00000525106 SPDYE1Q8NFV5 336 aaPredicted RBP15.37■□□□□ 0.05
C11orf58-205ENST00000525106 CLEC11AQ9Y240 323 aa15.33■□□□□ 0.04
C11orf58-205ENST00000525106 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
C11orf58-205ENST00000525106 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
C11orf58-205ENST00000525106 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
C11orf58-205ENST00000525106 MIER1Q8N108 512 aa15.18■□□□□ 0.02
C11orf58-205ENST00000525106 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
C11orf58-205ENST00000525106 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
C11orf58-205ENST00000525106 IFNLR1Q8IU57 520 aaPredicted RBP15.11■□□□□ 0.01
C11orf58-205ENST00000525106 KLHL34Q8N239 644 aa15.07■□□□□ 0
C11orf58-205ENST00000525106 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
C11orf58-205ENST00000525106 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
C11orf58-205ENST00000525106 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
C11orf58-205ENST00000525106 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
C11orf58-205ENST00000525106 SPOCK2Q92563 424 aa14.93□□□□□ -0.02
C11orf58-205ENST00000525106 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
C11orf58-205ENST00000525106 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
C11orf58-205ENST00000525106 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
C11orf58-205ENST00000525106 PRKAR2AP13861 404 aaKnown RBP14.88□□□□□ -0.03
C11orf58-205ENST00000525106 PIP4P2Q8N4L2 257 aa14.85□□□□□ -0.03
C11orf58-205ENST00000525106 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
C11orf58-205ENST00000525106 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
C11orf58-205ENST00000525106 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.05
C11orf58-205ENST00000525106 NUBP1P53384 320 aa14.73□□□□□ -0.05
C11orf58-205ENST00000525106 CIZ1Q9ULV3 898 aaPredicted RBP14.7□□□□□ -0.06
C11orf58-205ENST00000525106 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
C11orf58-205ENST00000525106 PKD2Q13563 968 aa14.65□□□□□ -0.06
C11orf58-205ENST00000525106 FAM212AQ96EL1 285 aa14.65□□□□□ -0.06
C11orf58-205ENST00000525106 GSE1Q14687 1217 aa14.64□□□□□ -0.07
C11orf58-205ENST00000525106 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
C11orf58-205ENST00000525106 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
C11orf58-205ENST00000525106 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
C11orf58-205ENST00000525106 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
C11orf58-205ENST00000525106 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms