RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
NKIRAS2-203ENST00000393879 DCAF8L2P0C7V8 631 aa17.48■□□□□ 0.39
NKIRAS2-203ENST00000393879 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
NKIRAS2-203ENST00000393879 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
NKIRAS2-203ENST00000393879 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.32
NKIRAS2-203ENST00000393879 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
NKIRAS2-203ENST00000393879 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
NKIRAS2-203ENST00000393879 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
NKIRAS2-203ENST00000393879 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
NKIRAS2-203ENST00000393879 ABCC9O60706 1549 aa15.96■□□□□ 0.14
NKIRAS2-203ENST00000393879 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
NKIRAS2-203ENST00000393879 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
NKIRAS2-203ENST00000393879 FAM9AQ8IZU1 332 aaPredicted RBP15.89■□□□□ 0.14
NKIRAS2-203ENST00000393879 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.13
NKIRAS2-203ENST00000393879 NACADO15069 1562 aa15.83■□□□□ 0.12
NKIRAS2-203ENST00000393879 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
NKIRAS2-203ENST00000393879 SCRIBQ14160 1630 aa15.74■□□□□ 0.11
NKIRAS2-203ENST00000393879 LOC105371045A0A1W2PR82 267 aa15.7■□□□□ 0.1
NKIRAS2-203ENST00000393879 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
NKIRAS2-203ENST00000393879 RSF1Q96T23 1441 aaPredicted RBP15.46■□□□□ 0.06
NKIRAS2-203ENST00000393879 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
NKIRAS2-203ENST00000393879 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
NKIRAS2-203ENST00000393879 HRCP23327 699 aa15.45■□□□□ 0.06
NKIRAS2-203ENST00000393879 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
NKIRAS2-203ENST00000393879 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
NKIRAS2-203ENST00000393879 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
NKIRAS2-203ENST00000393879 APLP2Q06481 763 aa15.31■□□□□ 0.04
NKIRAS2-203ENST00000393879 ZEB1P37275 1124 aaPredicted RBP15.31■□□□□ 0.04
NKIRAS2-203ENST00000393879 PPARGC1BQ86YN6 1023 aaKnown RBP15.3■□□□□ 0.04
NKIRAS2-203ENST00000393879 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
NKIRAS2-203ENST00000393879 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
NKIRAS2-203ENST00000393879 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
NKIRAS2-203ENST00000393879 RANGAP1P46060 587 aaPredicted RBP15.22■□□□□ 0.03
NKIRAS2-203ENST00000393879 CCER1Q8TC90 406 aaPredicted RBP15.17■□□□□ 0.02
NKIRAS2-203ENST00000393879 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
NKIRAS2-203ENST00000393879 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
NKIRAS2-203ENST00000393879 SMARCA4P51532 1647 aa15.06■□□□□ 0
NKIRAS2-203ENST00000393879 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
NKIRAS2-203ENST00000393879 WIZO95785 1651 aa14.99□□□□□ -0.01
NKIRAS2-203ENST00000393879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
NKIRAS2-203ENST00000393879 TOP2AP11388 1531 aaKnown RBP14.89□□□□□ -0.03
NKIRAS2-203ENST00000393879 CCDC88BA6NC98 1476 aa14.86□□□□□ -0.03
NKIRAS2-203ENST00000393879 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
NKIRAS2-203ENST00000393879 PRDM2Q13029 1718 aa14.85□□□□□ -0.03
NKIRAS2-203ENST00000393879 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
NKIRAS2-203ENST00000393879 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
NKIRAS2-203ENST00000393879 SMARCA2P51531 1590 aa14.82□□□□□ -0.04
NKIRAS2-203ENST00000393879 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
NKIRAS2-203ENST00000393879 EEA1Q15075 1411 aa14.79□□□□□ -0.04
NKIRAS2-203ENST00000393879 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
NKIRAS2-203ENST00000393879 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
NKIRAS2-203ENST00000393879 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
NKIRAS2-203ENST00000393879 SOGA1O94964 1423 aa14.71□□□□□ -0.06
NKIRAS2-203ENST00000393879 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
NKIRAS2-203ENST00000393879 TNIKQ9UKE5 1360 aa14.69□□□□□ -0.06
NKIRAS2-203ENST00000393879 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
NKIRAS2-203ENST00000393879 CENPBP07199 599 aaPredicted RBP14.68□□□□□ -0.06
NKIRAS2-203ENST00000393879 ITGAEP38570 1179 aa14.68□□□□□ -0.06
NKIRAS2-203ENST00000393879 CLIP1P30622 1438 aa14.62□□□□□ -0.07
NKIRAS2-203ENST00000393879 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
NKIRAS2-203ENST00000393879 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
NKIRAS2-203ENST00000393879 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
NKIRAS2-203ENST00000393879 YTHDC1Q96MU7 727 aaKnown RBP14.52□□□□□ -0.09
NKIRAS2-203ENST00000393879 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
NKIRAS2-203ENST00000393879 NCAPD3P42695 1498 aa14.49□□□□□ -0.09
NKIRAS2-203ENST00000393879 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
NKIRAS2-203ENST00000393879 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
NKIRAS2-203ENST00000393879 P3H3Q8IVL6 736 aa14.48□□□□□ -0.09
NKIRAS2-203ENST00000393879 FAM50AQ14320 339 aaKnown RBP14.47□□□□□ -0.09
NKIRAS2-203ENST00000393879 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
NKIRAS2-203ENST00000393879 VPS8Q8N3P4 1428 aa14.37□□□□□ -0.11
NKIRAS2-203ENST00000393879 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
NKIRAS2-203ENST00000393879 CUX2O14529 1486 aa14.32□□□□□ -0.12
NKIRAS2-203ENST00000393879 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
NKIRAS2-203ENST00000393879 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
NKIRAS2-203ENST00000393879 CADPSQ9ULU8 1353 aa14.28□□□□□ -0.12
NKIRAS2-203ENST00000393879 NEUROD1Q13562 356 aa14.28□□□□□ -0.12
NKIRAS2-203ENST00000393879 WDR97A6NE52 1622 aa14.27□□□□□ -0.12
NKIRAS2-203ENST00000393879 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.13
NKIRAS2-203ENST00000393879 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
NKIRAS2-203ENST00000393879 MYT1Q01538 1121 aa14.22□□□□□ -0.13
NKIRAS2-203ENST00000393879 ACIN1Q9UKV3 1341 aaKnown RBP14.21□□□□□ -0.13
NKIRAS2-203ENST00000393879 KIF21BO75037 1637 aa14.2□□□□□ -0.14
NKIRAS2-203ENST00000393879 CFTRP13569 1480 aa14.19□□□□□ -0.14
NKIRAS2-203ENST00000393879 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
NKIRAS2-203ENST00000393879 ARID3CA6NKF2 412 aa14.17□□□□□ -0.14
NKIRAS2-203ENST00000393879 FBLN2P98095 1184 aa14.17□□□□□ -0.14
NKIRAS2-203ENST00000393879 TRIM52Q96A61 297 aa14.17□□□□□ -0.14
NKIRAS2-203ENST00000393879 GTF3C3Q9Y5Q9 886 aa14.16□□□□□ -0.14
NKIRAS2-203ENST00000393879 MTUS2Q5JR59 1369 aa14.15□□□□□ -0.14
NKIRAS2-203ENST00000393879 CCNB3Q8WWL7 1395 aa14.14□□□□□ -0.15
NKIRAS2-203ENST00000393879 FHAD1B1AJZ9 1412 aa14.13□□□□□ -0.15
NKIRAS2-203ENST00000393879 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
NKIRAS2-203ENST00000393879 CLSPNQ9HAW4 1339 aa14.1□□□□□ -0.15
NKIRAS2-203ENST00000393879 CUX1P39880 1505 aa14.08□□□□□ -0.16
NKIRAS2-203ENST00000393879 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
NKIRAS2-203ENST00000393879 IGF1RP08069 1367 aa14.08□□□□□ -0.16
NKIRAS2-203ENST00000393879 ERICH3Q5RHP9 1530 aa14.07□□□□□ -0.16
NKIRAS2-203ENST00000393879 MIER1Q8N108 512 aa14.07□□□□□ -0.16
NKIRAS2-203ENST00000393879 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 302.7 ms