Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 FDX1P1-201ENST00000449115 551 ntBASIC17.72■□□□□ 0.43
CMKLR1Q99788 AC009065.1-201ENST00000564055 1225 ntBASIC17.72■□□□□ 0.43
CMKLR1Q99788 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
CMKLR1Q99788 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMKLR1Q99788 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.71■□□□□ 0.43
CMKLR1Q99788 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 AC104819.1-201ENST00000504587 486 ntBASIC17.71■□□□□ 0.43
CMKLR1Q99788 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.71■□□□□ 0.43
CMKLR1Q99788 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMKLR1Q99788 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.71■□□□□ 0.42
CMKLR1Q99788 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CMKLR1Q99788 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 AC006333.2-201ENST00000607957 2099 ntBASIC17.7■□□□□ 0.42
CMKLR1Q99788 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 FOSL1P1-201ENST00000511041 816 ntBASIC17.7■□□□□ 0.42
CMKLR1Q99788 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 IRX1P1-201ENST00000438849 1838 ntBASIC17.7■□□□□ 0.42
CMKLR1Q99788 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.7■□□□□ 0.42
CMKLR1Q99788 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMKLR1Q99788 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CMKLR1Q99788 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMKLR1Q99788 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMKLR1Q99788 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMKLR1Q99788 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMKLR1Q99788 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.69■□□□□ 0.42
CMKLR1Q99788 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CMKLR1Q99788 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMKLR1Q99788 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMKLR1Q99788 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms