Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC47A1Q96FL8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC47A1Q96FL8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC47A1Q96FL8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SLC47A1Q96FL8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC47A1Q96FL8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.52■□□□□ 0.39
SLC47A1Q96FL8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SLC47A1Q96FL8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 C1QL1P1-201ENST00000568105 661 ntBASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 LINC00896-202ENST00000609602 2128 ntBASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC47A1Q96FL8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC47A1Q96FL8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 ESRRAP1-201ENST00000400596 1257 ntBASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 MYC-208ENST00000641036 567 ntBASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 AC068587.9-201ENST00000641814 219 ntBASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC47A1Q96FL8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC47A1Q96FL8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms