Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 BCRP1-201ENST00000444246 691 ntBASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC168Q8NDH2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 AC190387.1-201ENST00000551683 408 ntBASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 COX20P2-201ENST00000452636 358 ntBASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 ALG1L5P-201ENST00000482043 771 ntBASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 YBX1P5-201ENST00000509441 847 ntBASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 OR7E14P-202ENST00000530490 1290 ntBASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC168Q8NDH2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 AC105339.3-201ENST00000560043 636 ntBASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 AC034236.2-201ENST00000606662 1610 ntBASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 AL356309.3-201ENST00000624132 1934 ntBASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 MIR4469-201ENST00000583919 79 ntBASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC168Q8NDH2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 AC006333.2-201ENST00000607957 2099 ntBASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC168Q8NDH2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms