Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
NHLRC1Q6VVB1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 AC007663.1-201ENST00000438948 1240 ntBASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 AP003041.3-201ENST00000527151 707 ntBASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.66■□□□□ 0.26
NHLRC1Q6VVB1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 KRT8P45-201ENST00000414328 1447 ntBASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.65■□□□□ 0.26
NHLRC1Q6VVB1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
NHLRC1Q6VVB1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 AC073592.3-201ENST00000625118 1834 ntBASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 MMP23A-201ENST00000234610 1017 ntBASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 EGLN1P1-201ENST00000531623 762 ntBASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 AC135050.7-201ENST00000624508 2218 ntBASIC16.64■□□□□ 0.25
NHLRC1Q6VVB1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NHLRC1Q6VVB1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms