Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRNA3P32297 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.58■□□□□ 0.72
CHRNA3P32297 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHRNA3P32297 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA3P32297 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.57■□□□□ 0.72
CHRNA3P32297 AC004951.3-201ENST00000418645 1148 ntBASIC19.57■□□□□ 0.72
CHRNA3P32297 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.57■□□□□ 0.72
CHRNA3P32297 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA3P32297 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.57■□□□□ 0.72
CHRNA3P32297 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.57■□□□□ 0.72
CHRNA3P32297 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.57■□□□□ 0.72
CHRNA3P32297 DGCR10-201ENST00000609839 495 ntBASIC19.57■□□□□ 0.72
CHRNA3P32297 AC011298.2-201ENST00000617989 482 ntBASIC19.57■□□□□ 0.72
CHRNA3P32297 AC097493.4-201ENST00000641197 219 ntBASIC19.57■□□□□ 0.72
CHRNA3P32297 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRNA3P32297 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHRNA3P32297 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA3P32297 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.56■□□□□ 0.72
CHRNA3P32297 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
CHRNA3P32297 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNA3P32297 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CHRNA3P32297 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHRNA3P32297 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNA3P32297 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA3P32297 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA3P32297 Z85996.1-201ENST00000494644 937 ntBASIC19.56■□□□□ 0.72
CHRNA3P32297 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA3P32297 AC012306.2-201ENST00000609350 630 ntBASIC19.56■□□□□ 0.72
CHRNA3P32297 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNA3P32297 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNA3P32297 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA3P32297 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA3P32297 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNA3P32297 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNA3P32297 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHRNA3P32297 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 AC008040.2-201ENST00000461049 708 ntBASIC19.55■□□□□ 0.72
CHRNA3P32297 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNA3P32297 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHRNA3P32297 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNA3P32297 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNA3P32297 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNA3P32297 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA3P32297 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CHRNA3P32297 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHRNA3P32297 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA3P32297 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA3P32297 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA3P32297 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CHRNA3P32297 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNA3P32297 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA3P32297 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA3P32297 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CHRNA3P32297 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.54■□□□□ 0.72
CHRNA3P32297 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHRNA3P32297 AC097488.1-201ENST00000507834 756 ntBASIC19.54■□□□□ 0.72
CHRNA3P32297 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNA3P32297 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNA3P32297 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CHRNA3P32297 AP000692.2-201ENST00000608391 879 ntBASIC19.54■□□□□ 0.72
CHRNA3P32297 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms