Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
XPAP23025 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.72■□□□□ 0.59
XPAP23025 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.72■□□□□ 0.59
XPAP23025 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
XPAP23025 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
XPAP23025 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
XPAP23025 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.72■□□□□ 0.59
XPAP23025 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.72■□□□□ 0.59
XPAP23025 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.72■□□□□ 0.59
XPAP23025 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.72■□□□□ 0.59
XPAP23025 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.72■□□□□ 0.59
XPAP23025 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.72■□□□□ 0.59
XPAP23025 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
XPAP23025 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
XPAP23025 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
XPAP23025 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.72■□□□□ 0.59
XPAP23025 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
XPAP23025 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.71■□□□□ 0.59
XPAP23025 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.71■□□□□ 0.59
XPAP23025 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.71■□□□□ 0.59
XPAP23025 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.71■□□□□ 0.59
XPAP23025 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
XPAP23025 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
XPAP23025 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
XPAP23025 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.7■□□□□ 0.58
XPAP23025 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
XPAP23025 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
XPAP23025 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
XPAP23025 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 STARP1-201ENST00000397973 869 ntBASIC18.7■□□□□ 0.58
XPAP23025 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
XPAP23025 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
XPAP23025 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.7■□□□□ 0.58
XPAP23025 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.7■□□□□ 0.58
XPAP23025 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
XPAP23025 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.7■□□□□ 0.58
XPAP23025 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
XPAP23025 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
XPAP23025 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
XPAP23025 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
XPAP23025 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
XPAP23025 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms