Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 HEIH-201ENST00000623091 1652 ntBASIC18.47■□□□□ 0.55
TSR3Q9UJK0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 AC120057.1-201ENST00000483947 663 ntBASIC18.47■□□□□ 0.55
TSR3Q9UJK0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSR3Q9UJK0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 AC126763.1-201ENST00000552015 2118 ntBASIC18.46■□□□□ 0.55
TSR3Q9UJK0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 AC009113.1-201ENST00000570267 2443 ntBASIC18.46■□□□□ 0.55
TSR3Q9UJK0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 KRT8P3-201ENST00000519669 1449 ntBASIC18.46■□□□□ 0.55
TSR3Q9UJK0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSR3Q9UJK0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.45■□□□□ 0.54
TSR3Q9UJK0 GPAT2P1-201ENST00000444924 1672 ntBASIC18.45■□□□□ 0.54
TSR3Q9UJK0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.45■□□□□ 0.54
TSR3Q9UJK0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 Z98044.1-201ENST00000632503 1764 ntBASIC18.45■□□□□ 0.54
TSR3Q9UJK0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
TSR3Q9UJK0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TSR3Q9UJK0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.44■□□□□ 0.54
TSR3Q9UJK0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.44■□□□□ 0.54
TSR3Q9UJK0 AC007613.1-201ENST00000572811 2597 ntBASIC18.44■□□□□ 0.54
TSR3Q9UJK0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TSR3Q9UJK0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TSR3Q9UJK0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms