Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 AL691432.2-201ENST00000607222 2038 ntBASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
POLR1BQ9H9Y6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 KRT18P38-201ENST00000449496 1282 ntBASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 CKBP1-201ENST00000565489 1086 ntBASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 AL691432.3-201ENST00000621860 400 ntBASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 BX119927.1-201ENST00000636596 1552 ntBASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR1BQ9H9Y6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 AC018470.1-201ENST00000624790 3129 ntBASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR1BQ9H9Y6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
POLR1BQ9H9Y6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms