Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC3.97□□□□□ -1.77
KRTAP4-4Q9BYR3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 AC022898.2-201ENST00000616822 1312 ntBASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC3.96□□□□□ -1.77
KRTAP4-4Q9BYR3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC133637.1-201ENST00000624115 1537 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL353803.4-201ENST00000565882 1934 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CALCB-201ENST00000324229 1070 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 HSPB11-203ENST00000371377 760 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NME4-202ENST00000382940 766 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 RPS8-202ENST00000396651 881 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 MED20-203ENST00000409060 815 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 Z84484.1-201ENST00000411643 319 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC105402.1-201ENST00000413336 545 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC092474.1-201ENST00000416158 1167 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL031282.1-204ENST00000418950 497 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL589823.1-201ENST00000429577 183 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 FAM8A4P-201ENST00000435433 1213 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AP000949.1-201ENST00000438328 629 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 VDAC1P13-201ENST00000447826 859 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL583843.1-201ENST00000456070 346 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SCARNA7-201ENST00000458797 330 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC096992.1-201ENST00000459808 709 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms