RNA–Protein interactions for RNA: ENST00000434859.1

AP000477.1-202, humanhuman

TSL 3 BASIC

Gene AP000477.1, Length 847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000477.1-202ENST00000434859 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
AP000477.1-202ENST00000434859 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
AP000477.1-202ENST00000434859 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
AP000477.1-202ENST00000434859 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
AP000477.1-202ENST00000434859 FOXD1Q16676 465 aa21.72■■□□□ 1.07
AP000477.1-202ENST00000434859 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
AP000477.1-202ENST00000434859 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
AP000477.1-202ENST00000434859 ADRA2BP18089 450 aa20.53■□□□□ 0.88
AP000477.1-202ENST00000434859 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
AP000477.1-202ENST00000434859 MSH5O43196 834 aa20.11■□□□□ 0.81
AP000477.1-202ENST00000434859 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
AP000477.1-202ENST00000434859 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
AP000477.1-202ENST00000434859 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
AP000477.1-202ENST00000434859 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
AP000477.1-202ENST00000434859 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
AP000477.1-202ENST00000434859 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
AP000477.1-202ENST00000434859 HOXD11P31277 338 aaPredicted RBP17.99■□□□□ 0.47
AP000477.1-202ENST00000434859 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
AP000477.1-202ENST00000434859 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
AP000477.1-202ENST00000434859 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
AP000477.1-202ENST00000434859 KCNA4P22459 653 aa17.74■□□□□ 0.43
AP000477.1-202ENST00000434859 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
AP000477.1-202ENST00000434859 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
AP000477.1-202ENST00000434859 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
AP000477.1-202ENST00000434859 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
AP000477.1-202ENST00000434859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
AP000477.1-202ENST00000434859 C1QBPQ07021 282 aaKnown RBP16.97■□□□□ 0.31
AP000477.1-202ENST00000434859 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
AP000477.1-202ENST00000434859 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
AP000477.1-202ENST00000434859 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
AP000477.1-202ENST00000434859 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
AP000477.1-202ENST00000434859 CAPN15O75808 1086 aa16.39■□□□□ 0.21
AP000477.1-202ENST00000434859 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
AP000477.1-202ENST00000434859 ZBTB22O15209 634 aa16.36■□□□□ 0.21
AP000477.1-202ENST00000434859 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
AP000477.1-202ENST00000434859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
AP000477.1-202ENST00000434859 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
AP000477.1-202ENST00000434859 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
AP000477.1-202ENST00000434859 DSG3P32926 999 aa16.27■□□□□ 0.2
AP000477.1-202ENST00000434859 APLP2Q06481 763 aa16.25■□□□□ 0.19
AP000477.1-202ENST00000434859 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
AP000477.1-202ENST00000434859 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
AP000477.1-202ENST00000434859 ABCB7O75027 752 aa16.09■□□□□ 0.17
AP000477.1-202ENST00000434859 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
AP000477.1-202ENST00000434859 POLA2Q14181 598 aa15.89■□□□□ 0.13
AP000477.1-202ENST00000434859 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
AP000477.1-202ENST00000434859 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
AP000477.1-202ENST00000434859 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
AP000477.1-202ENST00000434859 POTEHQ6S545 545 aa15.59■□□□□ 0.09
AP000477.1-202ENST00000434859 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
AP000477.1-202ENST00000434859 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
AP000477.1-202ENST00000434859 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
AP000477.1-202ENST00000434859 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
AP000477.1-202ENST00000434859 FBLN2P98095 1184 aa15.27■□□□□ 0.04
AP000477.1-202ENST00000434859 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
AP000477.1-202ENST00000434859 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
AP000477.1-202ENST00000434859 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
AP000477.1-202ENST00000434859 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
AP000477.1-202ENST00000434859 REM2Q8IYK8 340 aaPredicted RBP15.07■□□□□ 0
AP000477.1-202ENST00000434859 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
AP000477.1-202ENST00000434859 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
AP000477.1-202ENST00000434859 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
AP000477.1-202ENST00000434859 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
AP000477.1-202ENST00000434859 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
AP000477.1-202ENST00000434859 PIP4P2Q8N4L2 257 aa14.76□□□□□ -0.05
AP000477.1-202ENST00000434859 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
AP000477.1-202ENST00000434859 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
AP000477.1-202ENST00000434859 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
AP000477.1-202ENST00000434859 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
AP000477.1-202ENST00000434859 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
AP000477.1-202ENST00000434859 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
AP000477.1-202ENST00000434859 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
AP000477.1-202ENST00000434859 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
AP000477.1-202ENST00000434859 PROM2Q8N271 834 aa14.45□□□□□ -0.1
AP000477.1-202ENST00000434859 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
AP000477.1-202ENST00000434859 HAX1O00165 279 aa14.36□□□□□ -0.11
AP000477.1-202ENST00000434859 EVX2Q03828 476 aa14.32□□□□□ -0.12
AP000477.1-202ENST00000434859 FKBP8Q14318 412 aa14.32□□□□□ -0.12
AP000477.1-202ENST00000434859 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
AP000477.1-202ENST00000434859 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
AP000477.1-202ENST00000434859 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
AP000477.1-202ENST00000434859 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
AP000477.1-202ENST00000434859 CD44P16070 742 aaKnown RBP14.06□□□□□ -0.16
AP000477.1-202ENST00000434859 MIER1Q8N108 512 aa13.97□□□□□ -0.17
AP000477.1-202ENST00000434859 GABBR2O75899 941 aa13.94□□□□□ -0.18
AP000477.1-202ENST00000434859 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
AP000477.1-202ENST00000434859 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
AP000477.1-202ENST00000434859 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
AP000477.1-202ENST00000434859 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
AP000477.1-202ENST00000434859 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
AP000477.1-202ENST00000434859 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
AP000477.1-202ENST00000434859 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
AP000477.1-202ENST00000434859 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
AP000477.1-202ENST00000434859 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
AP000477.1-202ENST00000434859 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
AP000477.1-202ENST00000434859 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
AP000477.1-202ENST00000434859 CLCN6P51797 869 aa13.73□□□□□ -0.21
AP000477.1-202ENST00000434859 NUBP1P53384 320 aa13.72□□□□□ -0.21
AP000477.1-202ENST00000434859 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
AP000477.1-202ENST00000434859 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms