Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 TSPY12P-201ENST00000421279 868 ntBASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
CASKIN1Q8WXD9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 VENTXP7-201ENST00000475503 772 ntBASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 AC005336.2-201ENST00000593183 939 ntBASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 REXO1L6P-202ENST00000619970 1078 ntBASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CASKIN1Q8WXD9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 AL160237.2-201ENST00000556165 472 ntBASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CASKIN1Q8WXD9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC28.79■■■□□ 2.2
CASKIN1Q8WXD9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC28.78■■■□□ 2.2
CASKIN1Q8WXD9 CCS-201ENST00000310190 942 ntTSL 5 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 AP000347.1-202ENST00000435868 847 ntBASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 NUS1P2-201ENST00000417358 873 ntBASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 SAPCD2P3-201ENST00000455031 850 ntBASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms