Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 IRX1P1-201ENST00000438849 1838 ntBASIC15.23■□□□□ 0.03
TREML4Q6UXN2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 PCED1CP-201ENST00000419887 785 ntBASIC15.23■□□□□ 0.03
TREML4Q6UXN2 AC091390.4-202ENST00000476426 537 ntBASIC15.23■□□□□ 0.03
TREML4Q6UXN2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 AC139887.4-201ENST00000607877 719 ntBASIC15.23■□□□□ 0.03
TREML4Q6UXN2 FAM87A-204ENST00000613235 858 ntBASIC15.23■□□□□ 0.03
TREML4Q6UXN2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TREML4Q6UXN2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 HMGA1P5-201ENST00000412453 271 ntBASIC15.22■□□□□ 0.03
TREML4Q6UXN2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 AC026271.3-201ENST00000571884 352 ntBASIC15.22■□□□□ 0.03
TREML4Q6UXN2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TREML4Q6UXN2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 TSPY5P-201ENST00000426936 936 ntBASIC15.21■□□□□ 0.03
TREML4Q6UXN2 HCG4P8-203ENST00000443049 980 ntBASIC15.21■□□□□ 0.03
TREML4Q6UXN2 AC097488.1-201ENST00000507834 756 ntBASIC15.21■□□□□ 0.03
TREML4Q6UXN2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TREML4Q6UXN2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.21■□□□□ 0.02
TREML4Q6UXN2 IER3-202ENST00000376377 1350 ntBASIC15.21■□□□□ 0.02
TREML4Q6UXN2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.21■□□□□ 0.02
TREML4Q6UXN2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms