Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 AL390961.4-201ENST00000623958 2535 ntBASIC18.09■□□□□ 0.49
SGO1Q5FBB7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SGO1Q5FBB7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.08■□□□□ 0.49
SGO1Q5FBB7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SGO1Q5FBB7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGO1Q5FBB7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SGO1Q5FBB7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.08■□□□□ 0.49
SGO1Q5FBB7 AL135905.2-201ENST00000584934 1404 ntBASIC18.08■□□□□ 0.49
SGO1Q5FBB7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.08■□□□□ 0.49
SGO1Q5FBB7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SGO1Q5FBB7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SGO1Q5FBB7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 AL357033.4-201ENST00000617703 1807 ntBASIC18.07■□□□□ 0.48
SGO1Q5FBB7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 MESTP1-201ENST00000404287 994 ntBASIC18.07■□□□□ 0.48
SGO1Q5FBB7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 SLC25A1P4-201ENST00000567977 778 ntBASIC18.07■□□□□ 0.48
SGO1Q5FBB7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 RCC2P3-201ENST00000418112 1537 ntBASIC18.07■□□□□ 0.48
SGO1Q5FBB7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 FSCN1P1-201ENST00000568912 1481 ntBASIC18.07■□□□□ 0.48
SGO1Q5FBB7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SGO1Q5FBB7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.07■□□□□ 0.48
SGO1Q5FBB7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 GCSHP5-201ENST00000443090 522 ntBASIC18.06■□□□□ 0.48
SGO1Q5FBB7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SGO1Q5FBB7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms