Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN20P56880 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 FP475955.4-201ENST00000623131 1990 ntBASIC17.03■□□□□ 0.32
CLDN20P56880 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN20P56880 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.03■□□□□ 0.32
CLDN20P56880 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CLDN20P56880 AC010203.1-204ENST00000548782 407 ntBASIC17.03■□□□□ 0.32
CLDN20P56880 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.03■□□□□ 0.32
CLDN20P56880 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 AC010653.2-201ENST00000623505 997 ntBASIC17.03■□□□□ 0.32
CLDN20P56880 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN20P56880 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN20P56880 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLDN20P56880 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN20P56880 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN20P56880 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN20P56880 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN20P56880 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN20P56880 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 AC068880.1-201ENST00000507289 2297 ntBASIC17.02■□□□□ 0.32
CLDN20P56880 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 TERF1P1-201ENST00000311003 1181 ntBASIC17.02■□□□□ 0.32
CLDN20P56880 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN20P56880 AL137013.1-201ENST00000432946 1228 ntBASIC17.02■□□□□ 0.32
CLDN20P56880 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.02■□□□□ 0.32
CLDN20P56880 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLDN20P56880 KRT18P57-201ENST00000443599 1254 ntBASIC17.02■□□□□ 0.32
CLDN20P56880 FAM210CP-201ENST00000445714 574 ntBASIC17.02■□□□□ 0.32
CLDN20P56880 AC008622.2-201ENST00000617006 1229 ntBASIC17.02■□□□□ 0.32
CLDN20P56880 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.02■□□□□ 0.32
CLDN20P56880 AC020763.4-201ENST00000623414 4170 ntBASIC17.02■□□□□ 0.32
CLDN20P56880 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLDN20P56880 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN20P56880 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN20P56880 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN20P56880 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.02■□□□□ 0.31
CLDN20P56880 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN20P56880 AC090164.3-201ENST00000610780 2143 ntBASIC17.02■□□□□ 0.31
CLDN20P56880 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLDN20P56880 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.01■□□□□ 0.31
CLDN20P56880 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CLDN20P56880 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLDN20P56880 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLDN20P56880 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLDN20P56880 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLDN20P56880 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN20P56880 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CLDN20P56880 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLDN20P56880 HMGA1P5-201ENST00000412453 271 ntBASIC17.01■□□□□ 0.31
CLDN20P56880 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN20P56880 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.01■□□□□ 0.31
CLDN20P56880 RN7SL850P-201ENST00000579959 291 ntBASIC17.01■□□□□ 0.31
CLDN20P56880 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.01■□□□□ 0.31
CLDN20P56880 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CLDN20P56880 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN20P56880 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CLDN20P56880 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN20P56880 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN20P56880 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.01■□□□□ 0.31
CLDN20P56880 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLDN20P56880 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms