Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CTNNA1P35221 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CTNNA1P35221 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.64■□□□□ 0.74
CTNNA1P35221 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.64■□□□□ 0.74
CTNNA1P35221 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTNNA1P35221 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CTNNA1P35221 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.64■□□□□ 0.73
CTNNA1P35221 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CTNNA1P35221 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CTNNA1P35221 KSR1P1-201ENST00000446298 240 ntBASIC19.64■□□□□ 0.73
CTNNA1P35221 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.64■□□□□ 0.73
CTNNA1P35221 AP002982.1-201ENST00000492365 877 ntBASIC19.64■□□□□ 0.73
CTNNA1P35221 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.64■□□□□ 0.73
CTNNA1P35221 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CTNNA1P35221 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.64■□□□□ 0.73
CTNNA1P35221 HTR7P1-201ENST00000538670 1336 ntBASIC19.64■□□□□ 0.73
CTNNA1P35221 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.64■□□□□ 0.73
CTNNA1P35221 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTNNA1P35221 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.64■□□□□ 0.73
CTNNA1P35221 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNNA1P35221 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CTNNA1P35221 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.63■□□□□ 0.73
CTNNA1P35221 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.63■□□□□ 0.73
CTNNA1P35221 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.63■□□□□ 0.73
CTNNA1P35221 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTNNA1P35221 AL357033.4-201ENST00000617703 1807 ntBASIC19.62■□□□□ 0.73
CTNNA1P35221 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
CTNNA1P35221 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.62■□□□□ 0.73
CTNNA1P35221 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.62■□□□□ 0.73
CTNNA1P35221 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.62■□□□□ 0.73
CTNNA1P35221 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.62■□□□□ 0.73
CTNNA1P35221 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CTNNA1P35221 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.62■□□□□ 0.73
CTNNA1P35221 AC004951.3-201ENST00000418645 1148 ntBASIC19.62■□□□□ 0.73
CTNNA1P35221 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.62■□□□□ 0.73
CTNNA1P35221 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CTNNA1P35221 AC006058.3-201ENST00000606217 1069 ntBASIC19.62■□□□□ 0.73
CTNNA1P35221 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CTNNA1P35221 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CTNNA1P35221 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms