Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLTAP09496 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLTAP09496 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLTAP09496 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLTAP09496 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLTAP09496 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLTAP09496 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLTAP09496 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.32■□□□□ 0.84
CLTAP09496 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLTAP09496 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLTAP09496 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLTAP09496 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.31■□□□□ 0.84
CLTAP09496 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLTAP09496 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLTAP09496 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CLTAP09496 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLTAP09496 AC022616.7-201ENST00000525383 220 ntBASIC20.31■□□□□ 0.84
CLTAP09496 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.31■□□□□ 0.84
CLTAP09496 GCSHP2-201ENST00000560971 527 ntBASIC20.31■□□□□ 0.84
CLTAP09496 LINC01238-205ENST00000567549 1107 ntBASIC20.31■□□□□ 0.84
CLTAP09496 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.31■□□□□ 0.84
CLTAP09496 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLTAP09496 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.31■□□□□ 0.84
CLTAP09496 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.31■□□□□ 0.84
CLTAP09496 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLTAP09496 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLTAP09496 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.3■□□□□ 0.84
CLTAP09496 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.3■□□□□ 0.84
CLTAP09496 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 FAM8A6P-201ENST00000407496 1135 ntBASIC20.3■□□□□ 0.84
CLTAP09496 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.3■□□□□ 0.84
CLTAP09496 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.3■□□□□ 0.84
CLTAP09496 HOMER2P1-201ENST00000455653 964 ntBASIC20.3■□□□□ 0.84
CLTAP09496 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLTAP09496 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLTAP09496 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.3■□□□□ 0.84
CLTAP09496 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.3■□□□□ 0.84
CLTAP09496 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLTAP09496 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
CLTAP09496 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.3■□□□□ 0.84
CLTAP09496 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTAP09496 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLTAP09496 NEFHP1-201ENST00000412845 2629 ntBASIC20.29■□□□□ 0.84
CLTAP09496 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLTAP09496 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLTAP09496 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLTAP09496 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.29■□□□□ 0.84
CLTAP09496 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.29■□□□□ 0.84
CLTAP09496 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTAP09496 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 AC092647.4-201ENST00000457211 535 ntBASIC20.29■□□□□ 0.84
CLTAP09496 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.29■□□□□ 0.84
CLTAP09496 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTAP09496 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CLTAP09496 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CLTAP09496 AC112497.1-201ENST00000624824 639 ntBASIC20.29■□□□□ 0.84
CLTAP09496 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLTAP09496 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTAP09496 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTAP09496 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.29■□□□□ 0.84
CLTAP09496 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLTAP09496 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CLTAP09496 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLTAP09496 KRT8P7-201ENST00000533003 1432 ntBASIC20.28■□□□□ 0.84
CLTAP09496 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.28■□□□□ 0.84
CLTAP09496 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTAP09496 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms