Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CHTOPQ9Y3Y2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 PCDHA12-202ENST00000613593 2588 ntBASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 LINC00554-201ENST00000564841 3011 ntBASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 KRT18P20-201ENST00000548986 1279 ntBASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 AP001160.3-201ENST00000601484 763 ntBASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 CYP21A1P-202ENST00000354927 1481 ntBASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.36□□□□□ -0.27
CHTOPQ9Y3Y2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CHTOPQ9Y3Y2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms