Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ABCF3Q9NUQ8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 LINC00896-202ENST00000609602 2128 ntBASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 PRORSD1P-201ENST00000295112 541 ntBASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 RPPH1-201ENST00000516869 333 ntBASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 AC124016.1-201ENST00000609552 612 ntBASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCF3Q9NUQ8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 PCDHA12-202ENST00000613593 2588 ntBASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 AC142381.4-202ENST00000563973 229 ntBASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 AC004264.1-201ENST00000608354 794 ntBASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCF3Q9NUQ8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.89■□□□□ 0.62
ABCF3Q9NUQ8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCF3Q9NUQ8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.89■□□□□ 0.62
ABCF3Q9NUQ8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ABCF3Q9NUQ8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCF3Q9NUQ8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms