Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.49□□□□□ -0.41
SND1-IT1Q9HBX3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 AC006015.1-201ENST00000429970 570 ntBASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 AC073210.2-201ENST00000430369 194 ntBASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 KRT18P5-201ENST00000436075 1291 ntBASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SND1-IT1Q9HBX3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 AP006587.1-201ENST00000534129 1502 ntBASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 AC005181.1-201ENST00000604782 1256 ntBASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 LINC00896-202ENST00000609602 2128 ntBASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
SND1-IT1Q9HBX3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 AC134043.2-201ENST00000624206 2238 ntBASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.46□□□□□ -0.41
SND1-IT1Q9HBX3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms