Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 AC026748.1-201ENST00000624349 3251 ntBASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 FER1L4-210ENST00000615531 5998 ntBASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 AC007191.1-201ENST00000623179 2995 ntBASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CYSTM1Q9H1C7 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 AL513523.2-202ENST00000427283 2040 ntBASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 GOLGA2P11-201ENST00000562660 1621 ntBASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CYSTM1Q9H1C7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 CROCCP1-201ENST00000426910 5675 ntBASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC10.78□□□□□ -0.68
CYSTM1Q9H1C7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms