Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC47A1Q96FL8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 AL499627.1-201ENST00000569373 2188 ntBASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 AC026366.1-201ENST00000488803 879 ntBASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 AC004264.1-201ENST00000608354 794 ntBASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC47A1Q96FL8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SLC47A1Q96FL8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC47A1Q96FL8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms