Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 AC233702.3-201ENST00000578656 1387 ntBASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RP1L1Q8IWN7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 TERC-201ENST00000602385 541 ntBASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 IL9RP2-201ENST00000423948 1312 ntBASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RP1L1Q8IWN7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 BX842568.4-201ENST00000421222 227 ntBASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 FAM197Y8-203ENST00000450145 560 ntBASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 AC092183.1-201ENST00000469884 875 ntBASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 FOSL1P1-201ENST00000511041 816 ntBASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 AL355385.1-201ENST00000606123 409 ntBASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RP1L1Q8IWN7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.8■□□□□ 0.28
RP1L1Q8IWN7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms