Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTTNQ86VV8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTTNQ86VV8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 SLC25A1P4-201ENST00000567977 778 ntBASIC16.43■□□□□ 0.22
RTTNQ86VV8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 MIR1238-201ENST00000408483 83 ntBASIC16.43■□□□□ 0.22
RTTNQ86VV8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 DGCR10-201ENST00000609839 495 ntBASIC16.43■□□□□ 0.22
RTTNQ86VV8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 GPALPP1-207ENST00000611650 899 ntBASIC16.43■□□□□ 0.22
RTTNQ86VV8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTTNQ86VV8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTTNQ86VV8 WIZP1-201ENST00000531444 2299 ntBASIC16.42■□□□□ 0.22
RTTNQ86VV8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.42■□□□□ 0.22
RTTNQ86VV8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 HEIH-201ENST00000623091 1652 ntBASIC16.42■□□□□ 0.22
RTTNQ86VV8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 TSPY21P-201ENST00000433481 731 ntBASIC16.42■□□□□ 0.22
RTTNQ86VV8 AC104076.2-201ENST00000448912 469 ntBASIC16.42■□□□□ 0.22
RTTNQ86VV8 AC023511.2-201ENST00000618803 211 ntBASIC16.42■□□□□ 0.22
RTTNQ86VV8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.42■□□□□ 0.22
RTTNQ86VV8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTTNQ86VV8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 CA15P1-201ENST00000481698 905 ntBASIC16.41■□□□□ 0.22
RTTNQ86VV8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.41■□□□□ 0.22
RTTNQ86VV8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RTTNQ86VV8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RTTNQ86VV8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms