Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.59■□□□□ 0.57
LDB1Q86U70 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.59■□□□□ 0.57
LDB1Q86U70 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.59■□□□□ 0.57
LDB1Q86U70 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LDB1Q86U70 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.59■□□□□ 0.57
LDB1Q86U70 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.59■□□□□ 0.57
LDB1Q86U70 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LDB1Q86U70 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.59■□□□□ 0.57
LDB1Q86U70 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LDB1Q86U70 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LDB1Q86U70 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LDB1Q86U70 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LDB1Q86U70 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.59■□□□□ 0.57
LDB1Q86U70 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
LDB1Q86U70 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LDB1Q86U70 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
LDB1Q86U70 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.58■□□□□ 0.57
LDB1Q86U70 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.58■□□□□ 0.57
LDB1Q86U70 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.58■□□□□ 0.57
LDB1Q86U70 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LDB1Q86U70 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.58■□□□□ 0.57
LDB1Q86U70 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.58■□□□□ 0.56
LDB1Q86U70 MCCD1P1-208ENST00000445732 328 ntBASIC18.58■□□□□ 0.56
LDB1Q86U70 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.58■□□□□ 0.56
LDB1Q86U70 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB1Q86U70 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.58■□□□□ 0.56
LDB1Q86U70 AL023803.3-201ENST00000615559 522 ntBASIC18.58■□□□□ 0.56
LDB1Q86U70 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.58■□□□□ 0.56
LDB1Q86U70 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB1Q86U70 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB1Q86U70 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
LDB1Q86U70 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB1Q86U70 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB1Q86U70 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB1Q86U70 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LDB1Q86U70 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LDB1Q86U70 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LDB1Q86U70 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
LDB1Q86U70 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LDB1Q86U70 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
LDB1Q86U70 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.57■□□□□ 0.56
LDB1Q86U70 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 INGX-201ENST00000359239 846 ntBASIC18.57■□□□□ 0.56
LDB1Q86U70 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LDB1Q86U70 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LDB1Q86U70 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
LDB1Q86U70 CA15P1-201ENST00000481698 905 ntBASIC18.57■□□□□ 0.56
LDB1Q86U70 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.57■□□□□ 0.56
LDB1Q86U70 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LDB1Q86U70 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.57■□□□□ 0.56
LDB1Q86U70 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LDB1Q86U70 CYP2D8P-201ENST00000433633 1490 ntBASIC18.57■□□□□ 0.56
LDB1Q86U70 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.57■□□□□ 0.56
LDB1Q86U70 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LDB1Q86U70 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LDB1Q86U70 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
LDB1Q86U70 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LDB1Q86U70 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.56■□□□□ 0.56
LDB1Q86U70 AP003041.3-201ENST00000527151 707 ntBASIC18.56■□□□□ 0.56
LDB1Q86U70 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 AC018470.1-201ENST00000624790 3129 ntBASIC18.56■□□□□ 0.56
LDB1Q86U70 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LDB1Q86U70 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.56■□□□□ 0.56
LDB1Q86U70 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
LDB1Q86U70 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LDB1Q86U70 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms