Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PRCC-205ENST00000473387 452 ntTSL 25.81□□□□□ -1.485e-6■■□□□ 12.4
LARP4Q71RC2 ANXA11-207ENST00000463340 377 ntTSL 35.44□□□□□ -1.542e-8■■□□□ 12.4
LARP4Q71RC2 PAM-210ENST00000504691 1417 ntTSL 1 (best)5.22□□□□□ -1.575e-6■■□□□ 12.4
LARP4Q71RC2 MGST3-210ENST00000488688 741 ntTSL 24.79□□□□□ -1.645e-6■■□□□ 12.4
LARP4Q71RC2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.655e-6■■□□□ 12.4
LARP4Q71RC2 MRPL48-211ENST00000543058 699 ntTSL 34.29□□□□□ -1.725e-6■■□□□ 12.4
LARP4Q71RC2 PRMT1-205ENST00000525915 298 ntTSL 33.56□□□□□ -1.845e-6■■□□□ 12.4
LARP4Q71RC2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.78■□□□□ 0.63e-13■■□□□ 12.4
LARP4Q71RC2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.573e-13■■□□□ 12.4
LARP4Q71RC2 PLXND1-202ENST00000501038 1633 ntTSL 1 (best)18.3■□□□□ 0.521e-11■■□□□ 12.4
LARP4Q71RC2 PLXND1-204ENST00000504524 1701 ntTSL 1 (best)17.94■□□□□ 0.461e-11■■□□□ 12.4
LARP4Q71RC2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.36■□□□□ 0.371e-11■■□□□ 12.4
LARP4Q71RC2 PLXND1-214ENST00000512744 2662 ntTSL 1 (best)16.67■□□□□ 0.261e-11■■□□□ 12.4
LARP4Q71RC2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.081e-11■■□□□ 12.4
LARP4Q71RC2 CALM2-207ENST00000484408 682 ntTSL 519.66■□□□□ 0.741e-6■■□□□ 12.4
LARP4Q71RC2 CALM2-208ENST00000489742 522 ntTSL 314.65□□□□□ -0.061e-6■■□□□ 12.4
LARP4Q71RC2 ECI1-204ENST00000563029 776 ntTSL 222.9■■□□□ 1.262e-7■■□□□ 12.4
LARP4Q71RC2 RALBP1-205ENST00000585015 945 ntTSL 322.28■■□□□ 1.163e-10■■□□□ 12.4
LARP4Q71RC2 ZNF692-207ENST00000468455 644 ntTSL 516.37■□□□□ 0.211e-19■■□□□ 12.4
LARP4Q71RC2 MRPL18-204ENST00000480842 1075 ntTSL 313.31□□□□□ -0.283e-10■■□□□ 12.4
LARP4Q71RC2 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.481e-19■■□□□ 12.4
LARP4Q71RC2 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.493e-10■■□□□ 12.4
LARP4Q71RC2 MRPL18-202ENST00000476826 758 ntTSL 311.93□□□□□ -0.53e-10■■□□□ 12.4
LARP4Q71RC2 RALBP1-202ENST00000383432 4224 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.533e-10■■□□□ 12.4
LARP4Q71RC2 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.551e-19■■□□□ 12.4
LARP4Q71RC2 RALBP1-203ENST00000458039 836 ntTSL 311.07□□□□□ -0.643e-10■■□□□ 12.4
LARP4Q71RC2 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.683e-10■■□□□ 12.4
LARP4Q71RC2 EIF3A-202ENST00000462527 1192 ntTSL 28.03□□□□□ -1.121e-19■■□□□ 12.4
LARP4Q71RC2 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC6.97□□□□□ -1.293e-10■■□□□ 12.4
LARP4Q71RC2 PARK7-208ENST00000493373 624 ntTSL 512.21□□□□□ -0.451e-9■■□□□ 12.4
LARP4Q71RC2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.411e-32■■□□□ 12.4
LARP4Q71RC2 RPL29-201ENST00000294189 723 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.881e-32■■□□□ 12.4
LARP4Q71RC2 RPL29-206ENST00000481629 880 ntTSL 2 BASIC9.45□□□□□ -0.91e-32■■□□□ 12.4
LARP4Q71RC2 RPL29-205ENST00000480306 719 ntTSL 28.03□□□□□ -1.121e-32■■□□□ 12.4
LARP4Q71RC2 RPL29-207ENST00000486565 574 ntTSL 1 (best)6.53□□□□□ -1.361e-32■■□□□ 12.4
LARP4Q71RC2 NUTF2-208ENST00000587481 2608 nt9.05□□□□□ -0.962e-8■■□□□ 12.4
LARP4Q71RC2 TMEM141-205ENST00000484854 567 ntTSL 322.96■■□□□ 1.271e-7■■□□□ 12.4
LARP4Q71RC2 RPS3-212ENST00000529173 1373 ntTSL 513.1□□□□□ -0.311e-16■■□□□ 12.4
LARP4Q71RC2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.08■□□□□ 0.177e-15■■□□□ 12.4
LARP4Q71RC2 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC10.43□□□□□ -0.747e-15■■□□□ 12.4
LARP4Q71RC2 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.787e-15■■□□□ 12.4
LARP4Q71RC2 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC10.06□□□□□ -0.87e-15■■□□□ 12.4
LARP4Q71RC2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.96■□□□□ 0.313e-7■■□□□ 12.4
LARP4Q71RC2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.64■□□□□ 0.253e-7■■□□□ 12.4
LARP4Q71RC2 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.82e-7■■□□□ 12.4
LARP4Q71RC2 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC9.74□□□□□ -0.852e-7■■□□□ 12.4
LARP4Q71RC2 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.971e-16■■□□□ 12.4
LARP4Q71RC2 RPS3-207ENST00000526608 710 ntTSL 5 BASIC8.09□□□□□ -1.111e-16■■□□□ 12.4
LARP4Q71RC2 COX4I1-209ENST00000565078 566 ntTSL 413.49□□□□□ -0.252e-8■■□□□ 12.4
LARP4Q71RC2 NDUFA10-207ENST00000443626 776 ntTSL 511.09□□□□□ -0.639e-11■■□□□ 12.4
LARP4Q71RC2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.342e-7■■□□□ 12.4
LARP4Q71RC2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.32□□□□□ -0.282e-7■■□□□ 12.4
LARP4Q71RC2 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.572e-7■■□□□ 12.4
LARP4Q71RC2 PSENEN-201ENST00000222266 603 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.882e-7■■□□□ 12.4
LARP4Q71RC2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.03■□□□□ 0.162e-7■■□□□ 12.4
LARP4Q71RC2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.8■□□□□ 0.928e-10■■□□□ 12.4
LARP4Q71RC2 GPX4-208ENST00000592940 1184 ntTSL 520.56■□□□□ 0.888e-10■■□□□ 12.4
LARP4Q71RC2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.25■□□□□ 0.358e-10■■□□□ 12.4
LARP4Q71RC2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.278e-10■■□□□ 12.4
LARP4Q71RC2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.37■□□□□ 0.218e-10■■□□□ 12.4
LARP4Q71RC2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.128e-10■■□□□ 12.4
LARP4Q71RC2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.65□□□□□ -0.068e-10■■□□□ 12.4
LARP4Q71RC2 GPX4-203ENST00000585480 501 ntTSL 213.68□□□□□ -0.228e-10■■□□□ 12.4
LARP4Q71RC2 CCDC57-217ENST00000583053 188 ntAPPRIS ALT2 TSL 512.57□□□□□ -0.46e-8■■□□□ 12.4
LARP4Q71RC2 SMLR1-201ENST00000541421 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.754e-8■■□□□ 12.4
LARP4Q71RC2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.217e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-231ENST00000557433 1904 ntTSL 1 (best)16.37■□□□□ 0.217e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.87□□□□□ -0.037e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-222ENST00000555774 2311 ntTSL 1 (best)13.53□□□□□ -0.247e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.42□□□□□ -0.267e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-226ENST00000556825 2215 ntTSL 1 (best)13.41□□□□□ -0.267e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-217ENST00000555116 1885 ntTSL 213.13□□□□□ -0.317e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-233ENST00000557529 1369 ntTSL 212.19□□□□□ -0.467e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-207ENST00000553837 2152 ntTSL 512.07□□□□□ -0.487e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-212ENST00000554467 3416 ntTSL 211.48□□□□□ -0.577e-8■■□□□ 12.3
LARP4Q71RC2 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.577e-8■■□□□ 12.3
LARP4Q71RC2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.79■■□□□ 1.085e-7■■□□□ 12.3
LARP4Q71RC2 COMT-207ENST00000412786 871 ntAPPRIS ALT2 TSL 214.8□□□□□ -0.045e-7■■□□□ 12.3
LARP4Q71RC2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.7■□□□□ 0.743e-10■■□□□ 12.3
LARP4Q71RC2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.75■□□□□ 0.593e-10■■□□□ 12.3
LARP4Q71RC2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.23e-10■■□□□ 12.3
LARP4Q71RC2 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.21□□□□□ -0.293e-10■■□□□ 12.3
LARP4Q71RC2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.313e-8■■□□□ 12.3
LARP4Q71RC2 RPS7-209ENST00000491937 987 ntTSL 223.86■■□□□ 1.415e-10■■□□□ 12.3
LARP4Q71RC2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.33e-12■■□□□ 12.3
LARP4Q71RC2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.832e-12■■□□□ 12.3
LARP4Q71RC2 BCAM-209ENST00000590624 991 ntTSL 1 (best)18.03■□□□□ 0.482e-12■■□□□ 12.3
LARP4Q71RC2 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.11□□□□□ -0.312e-12■■□□□ 12.3
LARP4Q71RC2 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.92□□□□□ -0.341e-7■■□□□ 12.3
LARP4Q71RC2 SHMT2-229ENST00000557348 1659 ntTSL 212.41□□□□□ -0.421e-7■■□□□ 12.3
LARP4Q71RC2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.76■□□□□ 0.111e-7■■□□□ 12.3
LARP4Q71RC2 CARHSP1-212ENST00000568968 461 ntTSL 213.09□□□□□ -0.314e-12■■□□□ 12.3
LARP4Q71RC2 GPX4-205ENST00000587932 274 ntTSL 225.88■■□□□ 1.732e-9■■□□□ 12.3
LARP4Q71RC2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.58□□□□□ -0.076e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.74□□□□□ -0.216e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-204ENST00000311420 1583 ntTSL 510.09□□□□□ -0.796e-8■■□□□ 12.3
LARP4Q71RC2 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.992e-6■■□□□ 12.3
LARP4Q71RC2 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.126e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-220ENST00000496959 897 ntTSL 1 (best)7.86□□□□□ -1.156e-8■■□□□ 12.3
LARP4Q71RC2 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.162e-6■■□□□ 12.3
Retrieved 100 of 15,922 protein–RNA pairs in 217.9 ms