RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 AEBP2Q6ZN18 517 aaPredicted RBP25.31■■□□□ 1.64
EIF3A-202ENST00000462527 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
EIF3A-202ENST00000462527 SENP3Q9H4L4 574 aaPredicted RBP21.41■■□□□ 1.02
EIF3A-202ENST00000462527 PHF23Q9BUL5 403 aaPredicted RBP21.37■■□□□ 1.01
EIF3A-202ENST00000462527 FOXD1Q16676 465 aa20.01■□□□□ 0.79
EIF3A-202ENST00000462527 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
EIF3A-202ENST00000462527 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
EIF3A-202ENST00000462527 ADRA2BP18089 450 aa18.96■□□□□ 0.63
EIF3A-202ENST00000462527 PIAS4Q8N2W9 510 aaPredicted RBP18.75■□□□□ 0.59
EIF3A-202ENST00000462527 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
EIF3A-202ENST00000462527 MSH5O43196 834 aa18.49■□□□□ 0.55
EIF3A-202ENST00000462527 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
EIF3A-202ENST00000462527 KCNA4P22459 653 aa17.76■□□□□ 0.43
EIF3A-202ENST00000462527 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
EIF3A-202ENST00000462527 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
EIF3A-202ENST00000462527 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
EIF3A-202ENST00000462527 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
EIF3A-202ENST00000462527 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
EIF3A-202ENST00000462527 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
EIF3A-202ENST00000462527 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
EIF3A-202ENST00000462527 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
EIF3A-202ENST00000462527 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
EIF3A-202ENST00000462527 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
EIF3A-202ENST00000462527 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
EIF3A-202ENST00000462527 HOXD11P31277 338 aaPredicted RBP16.54■□□□□ 0.24
EIF3A-202ENST00000462527 RNF216Q9NWF9 866 aaPredicted RBP16.49■□□□□ 0.23
EIF3A-202ENST00000462527 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
EIF3A-202ENST00000462527 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
EIF3A-202ENST00000462527 ZBTB22O15209 634 aa16.3■□□□□ 0.2
EIF3A-202ENST00000462527 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
EIF3A-202ENST00000462527 BCANQ96GW7 911 aa15.87■□□□□ 0.13
EIF3A-202ENST00000462527 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
EIF3A-202ENST00000462527 NISCHQ9Y2I1 1504 aa15.85■□□□□ 0.13
EIF3A-202ENST00000462527 FKBP8Q14318 412 aa15.85■□□□□ 0.13
EIF3A-202ENST00000462527 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
EIF3A-202ENST00000462527 PRKCSHP14314 528 aaPredicted RBP15.81■□□□□ 0.12
EIF3A-202ENST00000462527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.126e-16■■■□□ 16.3
EIF3A-202ENST00000462527 PLCB2Q00722 1185 aa15.77■□□□□ 0.12
EIF3A-202ENST00000462527 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.12
EIF3A-202ENST00000462527 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
EIF3A-202ENST00000462527 TAOK2Q9UL54 1235 aa15.72■□□□□ 0.11
EIF3A-202ENST00000462527 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
EIF3A-202ENST00000462527 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
EIF3A-202ENST00000462527 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
EIF3A-202ENST00000462527 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
EIF3A-202ENST00000462527 ARXQ96QS3 562 aa15.47■□□□□ 0.07
EIF3A-202ENST00000462527 TPRNQ4KMQ1 711 aa15.44■□□□□ 0.06
EIF3A-202ENST00000462527 VSIG10Q8N0Z9 540 aa15.43■□□□□ 0.06
EIF3A-202ENST00000462527 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
EIF3A-202ENST00000462527 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
EIF3A-202ENST00000462527 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
EIF3A-202ENST00000462527 TIMELESSQ9UNS1 1208 aa15.24■□□□□ 0.03
EIF3A-202ENST00000462527 TULP1O00294 542 aaPredicted RBP15.18■□□□□ 0.02
EIF3A-202ENST00000462527 CAPN15O75808 1086 aa15.15■□□□□ 0.02
EIF3A-202ENST00000462527 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
EIF3A-202ENST00000462527 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
EIF3A-202ENST00000462527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
EIF3A-202ENST00000462527 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
EIF3A-202ENST00000462527 HOMEZQ8IX15 550 aa15.05■□□□□ -0
EIF3A-202ENST00000462527 GTF3C3Q9Y5Q9 886 aa15.04■□□□□ -0
EIF3A-202ENST00000462527 SAMD1Q6SPF0 538 aaPredicted RBP15.01□□□□□ -0.01
EIF3A-202ENST00000462527 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
EIF3A-202ENST00000462527 DSG3P32926 999 aa14.98□□□□□ -0.01
EIF3A-202ENST00000462527 APLP2Q06481 763 aa14.95□□□□□ -0.02
EIF3A-202ENST00000462527 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
EIF3A-202ENST00000462527 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
EIF3A-202ENST00000462527 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.9□□□□□ -0.02
EIF3A-202ENST00000462527 ABCB7O75027 752 aa14.89□□□□□ -0.03
EIF3A-202ENST00000462527 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
EIF3A-202ENST00000462527 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
EIF3A-202ENST00000462527 FBLN2P98095 1184 aa14.79□□□□□ -0.04
EIF3A-202ENST00000462527 BBXQ8WY36 941 aaPredicted RBP14.76□□□□□ -0.05
EIF3A-202ENST00000462527 RANGAP1P46060 587 aaPredicted RBP14.74□□□□□ -0.05
EIF3A-202ENST00000462527 PAXIP1Q6ZW49 1069 aaPredicted RBP14.71□□□□□ -0.05
EIF3A-202ENST00000462527 TMEM132AQ24JP5 1023 aa14.68□□□□□ -0.06
EIF3A-202ENST00000462527 NBR1Q14596 966 aa14.67□□□□□ -0.06
EIF3A-202ENST00000462527 POLA2Q14181 598 aa14.66□□□□□ -0.06
EIF3A-202ENST00000462527 CFAP44Q96MT7 982 aa14.66□□□□□ -0.06
EIF3A-202ENST00000462527 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
EIF3A-202ENST00000462527 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
EIF3A-202ENST00000462527 PKD2Q13563 968 aa14.59□□□□□ -0.07
EIF3A-202ENST00000462527 SPRYD3Q8NCJ5 442 aa14.5□□□□□ -0.09
EIF3A-202ENST00000462527 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
EIF3A-202ENST00000462527 TSHZ2Q9NRE2 1034 aa14.47□□□□□ -0.09
EIF3A-202ENST00000462527 PODXL2Q9NZ53 605 aa14.41□□□□□ -0.1
EIF3A-202ENST00000462527 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■■□□□ 14.4
EIF3A-202ENST00000462527 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
EIF3A-202ENST00000462527 ECM2O94769 699 aaPredicted RBP14.32□□□□□ -0.12
EIF3A-202ENST00000462527 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
EIF3A-202ENST00000462527 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
EIF3A-202ENST00000462527 PROM2Q8N271 834 aa14.25□□□□□ -0.13
EIF3A-202ENST00000462527 OSCARQ8IYS5 282 aa14.19□□□□□ -0.14
EIF3A-202ENST00000462527 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
EIF3A-202ENST00000462527 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
EIF3A-202ENST00000462527 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
EIF3A-202ENST00000462527 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
EIF3A-202ENST00000462527 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
EIF3A-202ENST00000462527 KLHL34Q8N239 644 aa14.08□□□□□ -0.16
EIF3A-202ENST00000462527 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
EIF3A-202ENST00000462527 RGL2O15211 777 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms