RNA–Protein interactions for RNA: ENST00000327892.12

TUBB-205, Transcript of tubulin beta class I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB, Length 2,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-205ENST00000327892 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
TUBB-205ENST00000327892 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
TUBB-205ENST00000327892 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
TUBB-205ENST00000327892 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
TUBB-205ENST00000327892 HRCP23327 699 aa17.12■□□□□ 0.33
TUBB-205ENST00000327892 PCGF6Q9BYE7 350 aa16.99■□□□□ 0.31
TUBB-205ENST00000327892 PPARGC1BQ86YN6 1023 aaKnown RBP16.95■□□□□ 0.3
TUBB-205ENST00000327892 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
TUBB-205ENST00000327892 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
TUBB-205ENST00000327892 ABCC9O60706 1549 aa16.71■□□□□ 0.27
TUBB-205ENST00000327892 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
TUBB-205ENST00000327892 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
TUBB-205ENST00000327892 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
TUBB-205ENST00000327892 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
TUBB-205ENST00000327892 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
TUBB-205ENST00000327892 RB1CC1Q8TDY2 1594 aa16.25■□□□□ 0.19
TUBB-205ENST00000327892 NACADO15069 1562 aa16.18■□□□□ 0.18
TUBB-205ENST00000327892 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
TUBB-205ENST00000327892 EHMT2Q96KQ7 1210 aa16.09■□□□□ 0.17
TUBB-205ENST00000327892 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
TUBB-205ENST00000327892 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
TUBB-205ENST00000327892 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
TUBB-205ENST00000327892 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
TUBB-205ENST00000327892 UNC13AQ9UPW8 1703 aa15.84■□□□□ 0.13
TUBB-205ENST00000327892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
TUBB-205ENST00000327892 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
TUBB-205ENST00000327892 ACIN1Q9UKV3 1341 aaKnown RBP15.77■□□□□ 0.11
TUBB-205ENST00000327892 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
TUBB-205ENST00000327892 CCER1Q8TC90 406 aaPredicted RBP15.71■□□□□ 0.11
TUBB-205ENST00000327892 GTF3C3Q9Y5Q9 886 aa15.7■□□□□ 0.1
TUBB-205ENST00000327892 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
TUBB-205ENST00000327892 DIEXFQ68CQ4 756 aaKnown RBP15.64■□□□□ 0.09
TUBB-205ENST00000327892 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
TUBB-205ENST00000327892 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
TUBB-205ENST00000327892 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
TUBB-205ENST00000327892 SCRIBQ14160 1630 aa15.51■□□□□ 0.07
TUBB-205ENST00000327892 YTHDC1Q96MU7 727 aaKnown RBP15.46■□□□□ 0.07
TUBB-205ENST00000327892 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
TUBB-205ENST00000327892 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
TUBB-205ENST00000327892 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.05
TUBB-205ENST00000327892 MYT1Q01538 1121 aa15.32■□□□□ 0.04
TUBB-205ENST00000327892 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
TUBB-205ENST00000327892 MIER1Q8N108 512 aa15.3■□□□□ 0.04
TUBB-205ENST00000327892 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
TUBB-205ENST00000327892 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
TUBB-205ENST00000327892 WIZO95785 1651 aa15.22■□□□□ 0.03
TUBB-205ENST00000327892 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
TUBB-205ENST00000327892 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
TUBB-205ENST00000327892 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
TUBB-205ENST00000327892 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
TUBB-205ENST00000327892 SOGA1O94964 1423 aa15.14■□□□□ 0.01
TUBB-205ENST00000327892 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
TUBB-205ENST00000327892 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
TUBB-205ENST00000327892 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
TUBB-205ENST00000327892 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
TUBB-205ENST00000327892 TNIKQ9UKE5 1360 aa15.07■□□□□ 0
TUBB-205ENST00000327892 RANGAP1P46060 587 aaPredicted RBP15.01□□□□□ -0.01
TUBB-205ENST00000327892 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
TUBB-205ENST00000327892 SUPT16HQ9Y5B9 1047 aaKnown RBP14.94□□□□□ -0.02
TUBB-205ENST00000327892 APLP2Q06481 763 aa14.87□□□□□ -0.03
TUBB-205ENST00000327892 CUX2O14529 1486 aa14.85□□□□□ -0.03
TUBB-205ENST00000327892 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
TUBB-205ENST00000327892 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
TUBB-205ENST00000327892 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.03
TUBB-205ENST00000327892 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
TUBB-205ENST00000327892 SMARCA2P51531 1590 aa14.82□□□□□ -0.04
TUBB-205ENST00000327892 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
TUBB-205ENST00000327892 EEA1Q15075 1411 aa14.82□□□□□ -0.04
TUBB-205ENST00000327892 KCNH8Q96L42 1107 aa14.81□□□□□ -0.04
TUBB-205ENST00000327892 CLIP1P30622 1438 aa14.81□□□□□ -0.04
TUBB-205ENST00000327892 BCANQ96GW7 911 aa14.75□□□□□ -0.05
TUBB-205ENST00000327892 PEG3Q9GZU2 1588 aa14.75□□□□□ -0.05
TUBB-205ENST00000327892 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
TUBB-205ENST00000327892 VPS8Q8N3P4 1428 aa14.73□□□□□ -0.05
TUBB-205ENST00000327892 ANP32EQ9BTT0 268 aa14.73□□□□□ -0.05
TUBB-205ENST00000327892 KANK4Q5T7N3 995 aaPredicted RBP14.71□□□□□ -0.05
TUBB-205ENST00000327892 SMARCA4P51532 1647 aa14.71□□□□□ -0.05
TUBB-205ENST00000327892 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
TUBB-205ENST00000327892 RAPGEF2Q9Y4G8 1499 aa14.68□□□□□ -0.06
TUBB-205ENST00000327892 ITGAEP38570 1179 aa14.68□□□□□ -0.06
TUBB-205ENST00000327892 ATAD2BQ9ULI0 1458 aa14.68□□□□□ -0.06
TUBB-205ENST00000327892 CLSPNQ9HAW4 1339 aa14.67□□□□□ -0.06
TUBB-205ENST00000327892 DNAJC5Q9H3Z4 198 aa14.66□□□□□ -0.06
TUBB-205ENST00000327892 FKBP8Q14318 412 aa14.63□□□□□ -0.07
TUBB-205ENST00000327892 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
TUBB-205ENST00000327892 KIF21BO75037 1637 aa14.61□□□□□ -0.07
TUBB-205ENST00000327892 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
TUBB-205ENST00000327892 LAMC3Q9Y6N6 1575 aa14.59□□□□□ -0.07
TUBB-205ENST00000327892 DDX10Q13206 875 aaKnown RBP14.59□□□□□ -0.07
TUBB-205ENST00000327892 HIRIP3Q9BW71 556 aaPredicted RBP14.55□□□□□ -0.08
TUBB-205ENST00000327892 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
TUBB-205ENST00000327892 RBM19Q9Y4C8 960 aaKnown RBP14.52□□□□□ -0.08
TUBB-205ENST00000327892 TRIM52Q96A61 297 aa14.52□□□□□ -0.09
TUBB-205ENST00000327892 ERCC6Q03468 1493 aa14.52□□□□□ -0.09
TUBB-205ENST00000327892 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
TUBB-205ENST00000327892 SIN3AQ96ST3 1273 aa14.5□□□□□ -0.09
TUBB-205ENST00000327892 ARAP1Q96P48 1450 aa14.45□□□□□ -0.1
TUBB-205ENST00000327892 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
TUBB-205ENST00000327892 RAB3GAP2Q9H2M9 1393 aa14.43□□□□□ -0.1
TUBB-205ENST00000327892 RRBP1Q9P2E9 1410 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms