Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.97■□□□□ 0.31
NIPAL3Q6P499 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 AC008040.2-201ENST00000461049 708 ntBASIC16.96■□□□□ 0.31
NIPAL3Q6P499 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 MIR4497-201ENST00000583208 89 ntBASIC16.96■□□□□ 0.31
NIPAL3Q6P499 REXO1L10P-201ENST00000615707 1290 ntBASIC16.96■□□□□ 0.31
NIPAL3Q6P499 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 AC130371.2-201ENST00000619443 611 ntBASIC16.96■□□□□ 0.31
NIPAL3Q6P499 REXO1L12P-201ENST00000622156 912 ntBASIC16.96■□□□□ 0.31
NIPAL3Q6P499 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.96■□□□□ 0.31
NIPAL3Q6P499 PCDHB18P-201ENST00000524813 2368 ntBASIC16.96■□□□□ 0.31
NIPAL3Q6P499 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NIPAL3Q6P499 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NIPAL3Q6P499 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NIPAL3Q6P499 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NIPAL3Q6P499 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.96■□□□□ 0.3
NIPAL3Q6P499 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NIPAL3Q6P499 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 AC068880.1-201ENST00000507289 2297 ntBASIC16.95■□□□□ 0.3
NIPAL3Q6P499 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 MESTP1-201ENST00000404287 994 ntBASIC16.95■□□□□ 0.3
NIPAL3Q6P499 AC116562.2-201ENST00000507042 360 ntBASIC16.95■□□□□ 0.3
NIPAL3Q6P499 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 KRT8P11-201ENST00000409686 1436 ntBASIC16.95■□□□□ 0.3
NIPAL3Q6P499 KRT17P2-201ENST00000300992 1314 ntBASIC16.95■□□□□ 0.3
NIPAL3Q6P499 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NIPAL3Q6P499 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPAL3Q6P499 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms