Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FNTAP49354 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.36■□□□□ 0.69
FNTAP49354 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
FNTAP49354 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.35■□□□□ 0.69
FNTAP49354 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FNTAP49354 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
FNTAP49354 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.35■□□□□ 0.69
FNTAP49354 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FNTAP49354 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.35■□□□□ 0.69
FNTAP49354 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.35■□□□□ 0.69
FNTAP49354 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.35■□□□□ 0.69
FNTAP49354 KRT16P5-201ENST00000455284 522 ntBASIC19.35■□□□□ 0.69
FNTAP49354 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.35■□□□□ 0.69
FNTAP49354 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
FNTAP49354 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
FNTAP49354 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FNTAP49354 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FNTAP49354 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.34■□□□□ 0.69
FNTAP49354 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.34■□□□□ 0.69
FNTAP49354 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FNTAP49354 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
FNTAP49354 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.34■□□□□ 0.69
FNTAP49354 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.34■□□□□ 0.69
FNTAP49354 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
FNTAP49354 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.34■□□□□ 0.69
FNTAP49354 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.34■□□□□ 0.69
FNTAP49354 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.34■□□□□ 0.69
FNTAP49354 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.34■□□□□ 0.69
FNTAP49354 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FNTAP49354 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.33■□□□□ 0.69
FNTAP49354 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
FNTAP49354 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
FNTAP49354 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.33■□□□□ 0.69
FNTAP49354 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.33■□□□□ 0.69
FNTAP49354 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.33■□□□□ 0.69
FNTAP49354 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FNTAP49354 AC093677.2-201ENST00000600169 1863 ntBASIC19.33■□□□□ 0.69
FNTAP49354 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FNTAP49354 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.33■□□□□ 0.69
FNTAP49354 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
FNTAP49354 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FNTAP49354 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.33■□□□□ 0.68
FNTAP49354 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
FNTAP49354 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 KRT17P3-201ENST00000420566 1262 ntBASIC19.33■□□□□ 0.68
FNTAP49354 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
FNTAP49354 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.33■□□□□ 0.68
FNTAP49354 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.33■□□□□ 0.68
FNTAP49354 AP003097.1-201ENST00000530657 1135 ntBASIC19.33■□□□□ 0.68
FNTAP49354 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.33■□□□□ 0.68
FNTAP49354 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.33■□□□□ 0.68
FNTAP49354 AC104771.1-201ENST00000603335 964 ntBASIC19.33■□□□□ 0.68
FNTAP49354 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.33■□□□□ 0.68
FNTAP49354 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.33■□□□□ 0.68
FNTAP49354 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.33■□□□□ 0.68
FNTAP49354 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
FNTAP49354 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.33■□□□□ 0.68
FNTAP49354 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.33■□□□□ 0.68
FNTAP49354 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FNTAP49354 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms