Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CTNNA1P35221 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNNA1P35221 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.68■□□□□ 0.74
CTNNA1P35221 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNNA1P35221 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNNA1P35221 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CTNNA1P35221 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CTNNA1P35221 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 AL162741.1-201ENST00000565563 1558 ntBASIC19.67■□□□□ 0.74
CTNNA1P35221 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 AC067852.2-201ENST00000590513 2313 ntBASIC19.67■□□□□ 0.74
CTNNA1P35221 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.67■□□□□ 0.74
CTNNA1P35221 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.67■□□□□ 0.74
CTNNA1P35221 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.67■□□□□ 0.74
CTNNA1P35221 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.67■□□□□ 0.74
CTNNA1P35221 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.67■□□□□ 0.74
CTNNA1P35221 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
CTNNA1P35221 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.67■□□□□ 0.74
CTNNA1P35221 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CTNNA1P35221 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.67■□□□□ 0.74
CTNNA1P35221 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTNNA1P35221 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CTNNA1P35221 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTNNA1P35221 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.66■□□□□ 0.74
CTNNA1P35221 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.66■□□□□ 0.74
CTNNA1P35221 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.66■□□□□ 0.74
CTNNA1P35221 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.66■□□□□ 0.74
CTNNA1P35221 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 AC091390.4-202ENST00000476426 537 ntBASIC19.66■□□□□ 0.74
CTNNA1P35221 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.66■□□□□ 0.74
CTNNA1P35221 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.66■□□□□ 0.74
CTNNA1P35221 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CTNNA1P35221 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CTNNA1P35221 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.66■□□□□ 0.74
CTNNA1P35221 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNNA1P35221 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.66■□□□□ 0.74
CTNNA1P35221 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.66■□□□□ 0.74
CTNNA1P35221 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.65■□□□□ 0.74
CTNNA1P35221 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CTNNA1P35221 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CTNNA1P35221 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CTNNA1P35221 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CTNNA1P35221 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.65■□□□□ 0.74
CTNNA1P35221 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
CTNNA1P35221 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 RPS2P4-201ENST00000476944 856 ntBASIC19.65■□□□□ 0.74
CTNNA1P35221 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.65■□□□□ 0.74
CTNNA1P35221 AC073648.6-201ENST00000641589 218 ntBASIC19.65■□□□□ 0.74
CTNNA1P35221 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNNA1P35221 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.65■□□□□ 0.74
CTNNA1P35221 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms