Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM17P0DL12 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM17P0DL12 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM17P0DL12 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM17P0DL12 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM17P0DL12 KRT8P8-201ENST00000434750 1448 ntBASIC13.87□□□□□ -0.19
SMIM17P0DL12 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM17P0DL12 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM17P0DL12 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM17P0DL12 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.87□□□□□ -0.19
SMIM17P0DL12 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMIM17P0DL12 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMIM17P0DL12 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.87□□□□□ -0.19
SMIM17P0DL12 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 AC005181.1-201ENST00000604782 1256 ntBASIC13.86□□□□□ -0.19
SMIM17P0DL12 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 LINC01126-201ENST00000623515 1646 ntBASIC13.86□□□□□ -0.19
SMIM17P0DL12 AC104417.2-201ENST00000562989 1793 ntBASIC13.86□□□□□ -0.19
SMIM17P0DL12 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMIM17P0DL12 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.85□□□□□ -0.19
SMIM17P0DL12 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 AC009053.2-201ENST00000563701 2365 ntBASIC13.85□□□□□ -0.19
SMIM17P0DL12 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 YBX1P10-201ENST00000444752 975 ntBASIC13.85□□□□□ -0.19
SMIM17P0DL12 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 AC093787.1-201ENST00000450396 207 ntBASIC13.85□□□□□ -0.19
SMIM17P0DL12 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 MIR6821-201ENST00000617625 74 ntBASIC13.85□□□□□ -0.19
SMIM17P0DL12 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 AC046158.3-201ENST00000624947 2558 ntBASIC13.85□□□□□ -0.19
SMIM17P0DL12 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.85□□□□□ -0.19
SMIM17P0DL12 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMIM17P0DL12 AL512353.2-201ENST00000448759 1962 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms