Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV12-3P01733 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV12-3P01733 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV12-3P01733 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV12-3P01733 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 AL023973.1-201ENST00000624619 620 ntBASIC14.37□□□□□ -0.11
TRBV12-3P01733 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 WIZP1-201ENST00000531444 2299 ntBASIC14.37□□□□□ -0.11
TRBV12-3P01733 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRBV12-3P01733 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.37□□□□□ -0.11
TRBV12-3P01733 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV12-3P01733 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 AC126763.1-201ENST00000552015 2118 ntBASIC14.36□□□□□ -0.11
TRBV12-3P01733 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 AL512604.3-201ENST00000569583 964 ntBASIC14.36□□□□□ -0.11
TRBV12-3P01733 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 AC034236.2-201ENST00000606662 1610 ntBASIC14.36□□□□□ -0.11
TRBV12-3P01733 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV12-3P01733 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV12-3P01733 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV12-3P01733 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV12-3P01733 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV12-3P01733 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV12-3P01733 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV12-3P01733 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRBV12-3P01733 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV12-3P01733 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV12-3P01733 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV12-3P01733 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRBV12-3P01733 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms