Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 LZTR1-212ENST00000480895 539 ntTSL 412.63□□□□□ -0.397e-7■□□□□ 9.3
SMNDC1O75940 LZTR1-217ENST00000497716 1031 ntTSL 512.63□□□□□ -0.397e-7■□□□□ 9.3
SMNDC1O75940 HECTD1-208ENST00000554882 3748 ntTSL 54.56□□□□□ -1.687e-12■□□□□ 9.3
SMNDC1O75940 HECTD1-210ENST00000555843 4281 ntTSL 24.38□□□□□ -1.717e-12■□□□□ 9.3
SMNDC1O75940 DMXL1-203ENST00000503802 1835 ntTSL 1 (best)9.63□□□□□ -0.875e-10■□□□□ 9.3
SMNDC1O75940 DMXL1-204ENST00000504031 569 ntTSL 47.53□□□□□ -1.25e-10■□□□□ 9.3
SMNDC1O75940 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.67□□□□□ -1.345e-10■□□□□ 9.3
SMNDC1O75940 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.85e-10■□□□□ 9.3
SMNDC1O75940 YARS-207ENST00000481895 1018 ntTSL 518.01■□□□□ 0.472e-8■□□□□ 9.2
SMNDC1O75940 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.382e-8■□□□□ 9.2
SMNDC1O75940 YARS-206ENST00000478828 1044 ntTSL 210.21□□□□□ -0.772e-8■□□□□ 9.2
SMNDC1O75940 YARS-210ENST00000616261 1167 ntTSL 5 BASIC8.14□□□□□ -1.112e-8■□□□□ 9.2
SMNDC1O75940 SLC3A2-219ENST00000542793 539 ntTSL 27.35□□□□□ -1.232e-8■□□□□ 9.2
SMNDC1O75940 SLC3A2-214ENST00000539507 534 ntTSL 36.22□□□□□ -1.412e-8■□□□□ 9.2
SMNDC1O75940 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.531e-7■□□□□ 9.2
SMNDC1O75940 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.651e-7■□□□□ 9.2
SMNDC1O75940 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.751e-7■□□□□ 9.2
SMNDC1O75940 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.91e-7■□□□□ 9.2
SMNDC1O75940 SNORD22.1-201ENST00000516331 125 ntBASIC-0.02□□□□□ -2.413e-11■□□□□ 9.2
SMNDC1O75940 STIL-202ENST00000360380 5225 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.724e-8■□□□□ 9.2
SMNDC1O75940 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.284e-8■□□□□ 9.2
SMNDC1O75940 STIL-209ENST00000447475 2984 ntAPPRIS ALT2 TSL 1 (best)7.05□□□□□ -1.284e-8■□□□□ 9.2
SMNDC1O75940 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.454e-8■□□□□ 9.2
SMNDC1O75940 STIL-206ENST00000418131 3417 ntTSL 24.87□□□□□ -1.634e-8■□□□□ 9.2
SMNDC1O75940 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.664e-8■□□□□ 9.2
SMNDC1O75940 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC9.99□□□□□ -0.817e-24■□□□□ 9.2
SMNDC1O75940 CPM-213ENST00000551897 655 ntTSL 59.77□□□□□ -0.857e-24■□□□□ 9.2
SMNDC1O75940 CPM-203ENST00000546556 697 ntTSL 29.06□□□□□ -0.967e-24■□□□□ 9.2
SMNDC1O75940 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.121e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.061e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.071e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-213ENST00000600239 5565 ntTSL 214.52□□□□□ -0.091e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.211e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-209ENST00000597280 814 ntTSL 312.5□□□□□ -0.411e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-204ENST00000593795 747 ntTSL 512.42□□□□□ -0.421e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-206ENST00000594773 4169 ntTSL 210.29□□□□□ -0.761e-12■□□□□ 9.2
SMNDC1O75940 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)10.19□□□□□ -0.781e-12■□□□□ 9.2
SMNDC1O75940 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.025e-8■□□□□ 9.2
SMNDC1O75940 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.035e-8■□□□□ 9.2
SMNDC1O75940 HGS-212ENST00000575058 632 ntTSL 314.76□□□□□ -0.055e-8■□□□□ 9.2
SMNDC1O75940 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.72□□□□□ -0.055e-8■□□□□ 9.2
SMNDC1O75940 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.15e-8■□□□□ 9.2
SMNDC1O75940 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.125e-8■□□□□ 9.2
SMNDC1O75940 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.165e-8■□□□□ 9.2
SMNDC1O75940 ISYNA1-214ENST00000583816 860 ntTSL 313.2□□□□□ -0.35e-8■□□□□ 9.2
SMNDC1O75940 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.94□□□□□ -0.345e-8■□□□□ 9.2
SMNDC1O75940 WASH7P-201ENST00000488147 1351 ntBASIC11.54□□□□□ -0.565e-8■□□□□ 9.2
SMNDC1O75940 ENO2-203ENST00000534977 351 ntTSL 310□□□□□ -0.815e-8■□□□□ 9.2
SMNDC1O75940 ENO2-204ENST00000535275 724 ntTSL 39.23□□□□□ -0.935e-8■□□□□ 9.2
SMNDC1O75940 ZNF638-225ENST00000494241 703 ntTSL 38.11□□□□□ -1.115e-8■□□□□ 9.2
SMNDC1O75940 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.425e-8■□□□□ 9.2
SMNDC1O75940 ZNF638-217ENST00000483421 2076 ntTSL 26.15□□□□□ -1.425e-8■□□□□ 9.2
SMNDC1O75940 ENO2-213ENST00000543975 416 ntTSL 56.12□□□□□ -1.435e-8■□□□□ 9.2
SMNDC1O75940 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.755e-8■□□□□ 9.2
SMNDC1O75940 ZNF638-219ENST00000487638 4233 ntTSL 1 (best)2.53□□□□□ -2.015e-8■□□□□ 9.2
SMNDC1O75940 ZNF638-202ENST00000409407 4470 ntTSL 22.32□□□□□ -2.045e-8■□□□□ 9.2
SMNDC1O75940 NAP1L4-214ENST00000528261 644 ntTSL 27.49□□□□□ -1.212e-11■□□□□ 9.2
SMNDC1O75940 NAP1L4-208ENST00000483643 690 ntTSL 27.18□□□□□ -1.262e-11■□□□□ 9.2
SMNDC1O75940 NAP1L4-215ENST00000528363 685 ntTSL 27.18□□□□□ -1.262e-11■□□□□ 9.2
SMNDC1O75940 ATP6V0B-203ENST00000468183 2432 ntTSL 1 (best)23.4■■□□□ 1.346e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-208ENST00000473485 1664 ntTSL 221.08■□□□□ 0.966e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.57■□□□□ 0.726e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.626e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.67■□□□□ 0.426e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-206ENST00000472277 536 ntTSL 316.8■□□□□ 0.286e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.77□□□□□ -0.216e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-209ENST00000496131 962 ntTSL 312.36□□□□□ -0.436e-7■□□□□ 9.2
SMNDC1O75940 ATP6V0B-207ENST00000472505 411 ntTSL 511.79□□□□□ -0.526e-7■□□□□ 9.2
SMNDC1O75940 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.11e-7■□□□□ 9.2
SMNDC1O75940 CCT3-206ENST00000368262 2048 ntTSL 215.2■□□□□ 0.021e-7■□□□□ 9.2
SMNDC1O75940 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC14.5□□□□□ -0.091e-7■□□□□ 9.2
SMNDC1O75940 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.2□□□□□ -0.141e-7■□□□□ 9.2
SMNDC1O75940 CCT3-203ENST00000368258 1885 ntTSL 213.42□□□□□ -0.261e-7■□□□□ 9.2
SMNDC1O75940 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.38□□□□□ -0.271e-7■□□□□ 9.2
SMNDC1O75940 NOL4L-204ENST00000375677 541 ntTSL 310.57□□□□□ -0.721e-7■□□□□ 9.2
SMNDC1O75940 CCT3-212ENST00000478640 583 ntTSL 210.25□□□□□ -0.771e-7■□□□□ 9.2
SMNDC1O75940 CCT3-202ENST00000368256 1063 ntTSL 39.76□□□□□ -0.851e-7■□□□□ 9.2
SMNDC1O75940 CCT3-210ENST00000463132 610 ntTSL 37.68□□□□□ -1.181e-7■□□□□ 9.2
SMNDC1O75940 CCT3-208ENST00000415548 513 ntTSL 37.52□□□□□ -1.211e-7■□□□□ 9.2
SMNDC1O75940 CCT3-215ENST00000496684 748 ntTSL 26.88□□□□□ -1.311e-7■□□□□ 9.2
SMNDC1O75940 CCT3-216ENST00000533194 581 ntTSL 36.6□□□□□ -1.351e-7■□□□□ 9.2
SMNDC1O75940 CCT3-209ENST00000446905 593 ntTSL 36.26□□□□□ -1.411e-7■□□□□ 9.2
SMNDC1O75940 CCT3-214ENST00000490221 696 ntTSL 26.26□□□□□ -1.411e-7■□□□□ 9.2
SMNDC1O75940 CCT3-207ENST00000413555 842 ntTSL 56.24□□□□□ -1.411e-7■□□□□ 9.2
SMNDC1O75940 POLR3E-206ENST00000563282 448 ntTSL 24.49□□□□□ -1.691e-7■□□□□ 9.2
SMNDC1O75940 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.162e-7■□□□□ 9.1
SMNDC1O75940 VEGFA-216ENST00000512683 475 ntTSL 1 (best)11.34□□□□□ -0.594e-18■□□□□ 9.1
SMNDC1O75940 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.99■■□□□ 1.111e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.19□□□□□ -0.31e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-203ENST00000525981 297 ntTSL 513.19□□□□□ -0.31e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.41e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-212ENST00000534599 651 ntTSL 511.68□□□□□ -0.541e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-208ENST00000530913 805 ntTSL 2 BASIC10.5□□□□□ -0.731e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-204ENST00000526562 519 ntTSL 2 BASIC9.83□□□□□ -0.841e-323■□□□□ 9.1
SMNDC1O75940 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.96□□□□□ -1.31e-323■□□□□ 9.1
SMNDC1O75940 SNORA3B-201ENST00000391305 131 ntBASIC-0.38□□□□□ -2.471e-323■□□□□ 9.1
SMNDC1O75940 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.323e-6■□□□□ 9.1
SMNDC1O75940 LONP1-204ENST00000586617 471 ntTSL 522.98■■□□□ 1.273e-6■□□□□ 9.1
SMNDC1O75940 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.52■■□□□ 1.23e-6■□□□□ 9.1
SMNDC1O75940 MEIOB-207ENST00000496541 807 ntTSL 522.19■■□□□ 1.143e-6■□□□□ 9.1
Retrieved 100 of 11,362 protein–RNA pairs in 126.8 ms