RNA–Protein interactions for RNA: ENST00000551897.5

CPM-213, Transcript of carboxypeptidase M, humanhuman

TSL 5

Gene CPM, Length 655 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-213ENST00000551897 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
CPM-213ENST00000551897 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
CPM-213ENST00000551897 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
CPM-213ENST00000551897 PHF23Q9BUL5 403 aaPredicted RBP23.42■■□□□ 1.34
CPM-213ENST00000551897 PLPPR3Q6T4P5 718 aa21.85■■□□□ 1.09
CPM-213ENST00000551897 FOXD1Q16676 465 aa21.65■■□□□ 1.06
CPM-213ENST00000551897 ADRA2BP18089 450 aa20.47■□□□□ 0.87
CPM-213ENST00000551897 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
CPM-213ENST00000551897 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
CPM-213ENST00000551897 MSH5O43196 834 aa20.33■□□□□ 0.85
CPM-213ENST00000551897 KCNA4P22459 653 aa19.66■□□□□ 0.74
CPM-213ENST00000551897 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
CPM-213ENST00000551897 EHMT2Q96KQ7 1210 aa19.07■□□□□ 0.64
CPM-213ENST00000551897 POTEDQ86YR6 584 aa19.04■□□□□ 0.64
CPM-213ENST00000551897 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
CPM-213ENST00000551897 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
CPM-213ENST00000551897 SLC4A1APQ9BWU0 796 aaKnown RBP18.83■□□□□ 0.6
CPM-213ENST00000551897 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
CPM-213ENST00000551897 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
CPM-213ENST00000551897 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
CPM-213ENST00000551897 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
CPM-213ENST00000551897 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
CPM-213ENST00000551897 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
CPM-213ENST00000551897 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
CPM-213ENST00000551897 ZBTB22O15209 634 aa18.1■□□□□ 0.49
CPM-213ENST00000551897 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
CPM-213ENST00000551897 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
CPM-213ENST00000551897 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
CPM-213ENST00000551897 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
CPM-213ENST00000551897 MYCNP04198 464 aaPredicted RBP17.31■□□□□ 0.36
CPM-213ENST00000551897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
CPM-213ENST00000551897 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
CPM-213ENST00000551897 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
CPM-213ENST00000551897 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
CPM-213ENST00000551897 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
CPM-213ENST00000551897 U3KPZ7 1027 aaPredicted RBP16.84■□□□□ 0.29
CPM-213ENST00000551897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
CPM-213ENST00000551897 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
CPM-213ENST00000551897 SAMD1Q6SPF0 538 aaPredicted RBP16.81■□□□□ 0.28
CPM-213ENST00000551897 ATF5Q9Y2D1 282 aaPredicted RBP16.8■□□□□ 0.28
CPM-213ENST00000551897 APLP2Q06481 763 aa16.74■□□□□ 0.27
CPM-213ENST00000551897 FKBP8Q14318 412 aa16.72■□□□□ 0.27
CPM-213ENST00000551897 CAPN15O75808 1086 aa16.56■□□□□ 0.24
CPM-213ENST00000551897 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
CPM-213ENST00000551897 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
CPM-213ENST00000551897 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
CPM-213ENST00000551897 RTN4Q9NQC3 1192 aaKnown RBP16.39■□□□□ 0.21
CPM-213ENST00000551897 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
CPM-213ENST00000551897 DSG3P32926 999 aa16.26■□□□□ 0.19
CPM-213ENST00000551897 ABCB7O75027 752 aa16.12■□□□□ 0.17
CPM-213ENST00000551897 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
CPM-213ENST00000551897 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
CPM-213ENST00000551897 FBLN2P98095 1184 aa16.04■□□□□ 0.16
CPM-213ENST00000551897 POLA2Q14181 598 aa16.04■□□□□ 0.16
CPM-213ENST00000551897 FBXO3Q9UK99 471 aa15.93■□□□□ 0.14
CPM-213ENST00000551897 PROM2Q8N271 834 aa15.9■□□□□ 0.14
CPM-213ENST00000551897 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
CPM-213ENST00000551897 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
CPM-213ENST00000551897 RBM42Q9BTD8 480 aaKnown RBP15.72■□□□□ 0.11
CPM-213ENST00000551897 VASPP50552 380 aaPredicted RBP15.71■□□□□ 0.11
CPM-213ENST00000551897 IFNLR1Q8IU57 520 aaPredicted RBP15.54■□□□□ 0.08
CPM-213ENST00000551897 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
CPM-213ENST00000551897 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
CPM-213ENST00000551897 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
CPM-213ENST00000551897 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
CPM-213ENST00000551897 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
CPM-213ENST00000551897 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
CPM-213ENST00000551897 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
CPM-213ENST00000551897 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
CPM-213ENST00000551897 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
CPM-213ENST00000551897 PKD2Q13563 968 aa15.28■□□□□ 0.04
CPM-213ENST00000551897 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
CPM-213ENST00000551897 SPOCK2Q92563 424 aa15.24■□□□□ 0.03
CPM-213ENST00000551897 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
CPM-213ENST00000551897 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
CPM-213ENST00000551897 PLCB2Q00722 1185 aa15.15■□□□□ 0.02
CPM-213ENST00000551897 MIER1Q8N108 512 aa15.15■□□□□ 0.02
CPM-213ENST00000551897 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
CPM-213ENST00000551897 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
CPM-213ENST00000551897 ECM2O94769 699 aaPredicted RBP15.07■□□□□ 0
CPM-213ENST00000551897 POTEHQ6S545 545 aa15.06■□□□□ 0
CPM-213ENST00000551897 PLEKHG5O94827 1062 aa15.02■□□□□ -0
CPM-213ENST00000551897 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
CPM-213ENST00000551897 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
CPM-213ENST00000551897 PITPNM1O00562 1244 aa14.94□□□□□ -0.02
CPM-213ENST00000551897 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
CPM-213ENST00000551897 RGL2O15211 777 aa14.9□□□□□ -0.02
CPM-213ENST00000551897 CIZ1Q9ULV3 898 aaPredicted RBP14.89□□□□□ -0.03
CPM-213ENST00000551897 CLEC11AQ9Y240 323 aa14.88□□□□□ -0.03
CPM-213ENST00000551897 BBXQ8WY36 941 aaPredicted RBP14.86□□□□□ -0.03
CPM-213ENST00000551897 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
CPM-213ENST00000551897 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
CPM-213ENST00000551897 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
CPM-213ENST00000551897 PIP4P2Q8N4L2 257 aa14.76□□□□□ -0.05
CPM-213ENST00000551897 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
CPM-213ENST00000551897 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
CPM-213ENST00000551897 PAXIP1Q6ZW49 1069 aaPredicted RBP14.72□□□□□ -0.05
CPM-213ENST00000551897 NUBP1P53384 320 aa14.71□□□□□ -0.05
CPM-213ENST00000551897 GSE1Q14687 1217 aa14.71□□□□□ -0.05
CPM-213ENST00000551897 VSIG10Q8N0Z9 540 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms