RNA–Protein interactions for RNA: ENST00000546556.1

CPM-203, Transcript of carboxypeptidase M, humanhuman

TSL 2

Gene CPM, Length 697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-203ENST00000546556 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
CPM-203ENST00000546556 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
CPM-203ENST00000546556 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
CPM-203ENST00000546556 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
CPM-203ENST00000546556 PLPPR3Q6T4P5 718 aa20.51■□□□□ 0.87
CPM-203ENST00000546556 FOXD1Q16676 465 aa19.5■□□□□ 0.71
CPM-203ENST00000546556 ADRA2BP18089 450 aa19.16■□□□□ 0.66
CPM-203ENST00000546556 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
CPM-203ENST00000546556 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
CPM-203ENST00000546556 KCNA4P22459 653 aa18.23■□□□□ 0.51
CPM-203ENST00000546556 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
CPM-203ENST00000546556 MSH5O43196 834 aa17.96■□□□□ 0.47
CPM-203ENST00000546556 NCBP3Q53F19 620 aaKnown RBP17.84■□□□□ 0.45
CPM-203ENST00000546556 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
CPM-203ENST00000546556 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
CPM-203ENST00000546556 CNKSR2Q8WXI2 1034 aa17.52■□□□□ 0.4
CPM-203ENST00000546556 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
CPM-203ENST00000546556 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
CPM-203ENST00000546556 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
CPM-203ENST00000546556 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
CPM-203ENST00000546556 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
CPM-203ENST00000546556 DNAJC5BQ9UF47 199 aa17.09■□□□□ 0.33
CPM-203ENST00000546556 RNF216Q9NWF9 866 aaPredicted RBP17.05■□□□□ 0.32
CPM-203ENST00000546556 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
CPM-203ENST00000546556 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
CPM-203ENST00000546556 ZBTB22O15209 634 aa16.76■□□□□ 0.27
CPM-203ENST00000546556 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
CPM-203ENST00000546556 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
CPM-203ENST00000546556 MYCNP04198 464 aaPredicted RBP16.2■□□□□ 0.18
CPM-203ENST00000546556 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
CPM-203ENST00000546556 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
CPM-203ENST00000546556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
CPM-203ENST00000546556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
CPM-203ENST00000546556 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
CPM-203ENST00000546556 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
CPM-203ENST00000546556 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
CPM-203ENST00000546556 ATF5Q9Y2D1 282 aaPredicted RBP15.64■□□□□ 0.09
CPM-203ENST00000546556 APLP2Q06481 763 aa15.59■□□□□ 0.09
CPM-203ENST00000546556 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
CPM-203ENST00000546556 FKBP8Q14318 412 aa15.44■□□□□ 0.06
CPM-203ENST00000546556 RNF39Q9H2S5 420 aa15.41■□□□□ 0.06
CPM-203ENST00000546556 ZNF219Q9P2Y4 722 aaPredicted RBP15.4■□□□□ 0.06
CPM-203ENST00000546556 C1QBPQ07021 282 aaKnown RBP15.22■□□□□ 0.03
CPM-203ENST00000546556 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
CPM-203ENST00000546556 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
CPM-203ENST00000546556 CAPN15O75808 1086 aa15.09■□□□□ 0.01
CPM-203ENST00000546556 AMER1Q5JTC6 1135 aaPredicted RBP15.08■□□□□ 0
CPM-203ENST00000546556 POLA2Q14181 598 aa15.04■□□□□ -0
CPM-203ENST00000546556 FBLN2P98095 1184 aa15.03■□□□□ -0
CPM-203ENST00000546556 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
CPM-203ENST00000546556 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
CPM-203ENST00000546556 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
CPM-203ENST00000546556 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
CPM-203ENST00000546556 FBXO3Q9UK99 471 aa14.86□□□□□ -0.03
CPM-203ENST00000546556 PROM2Q8N271 834 aa14.85□□□□□ -0.03
CPM-203ENST00000546556 ABCB7O75027 752 aa14.79□□□□□ -0.04
CPM-203ENST00000546556 DSG3P32926 999 aa14.74□□□□□ -0.05
CPM-203ENST00000546556 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
CPM-203ENST00000546556 SPDYE2BA6NHP3 402 aa14.53□□□□□ -0.08
CPM-203ENST00000546556 SPDYE6P0CI01 402 aa14.53□□□□□ -0.08
CPM-203ENST00000546556 SPDYE2Q495Y8 402 aa14.53□□□□□ -0.08
CPM-203ENST00000546556 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
CPM-203ENST00000546556 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
CPM-203ENST00000546556 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
CPM-203ENST00000546556 SLC24A1O60721 1099 aa14.41□□□□□ -0.1
CPM-203ENST00000546556 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
CPM-203ENST00000546556 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
CPM-203ENST00000546556 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPM-203ENST00000546556 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
CPM-203ENST00000546556 SPOCK2Q92563 424 aa14.17□□□□□ -0.14
CPM-203ENST00000546556 PLCD3Q8N3E9 789 aa14.16□□□□□ -0.14
CPM-203ENST00000546556 MIER1Q8N108 512 aa14.13□□□□□ -0.15
CPM-203ENST00000546556 PKD2Q13563 968 aa14.12□□□□□ -0.15
CPM-203ENST00000546556 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
CPM-203ENST00000546556 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
CPM-203ENST00000546556 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
CPM-203ENST00000546556 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
CPM-203ENST00000546556 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
CPM-203ENST00000546556 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
CPM-203ENST00000546556 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
CPM-203ENST00000546556 PLCB2Q00722 1185 aa13.9□□□□□ -0.18
CPM-203ENST00000546556 POTEHQ6S545 545 aa13.84□□□□□ -0.19
CPM-203ENST00000546556 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
CPM-203ENST00000546556 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
CPM-203ENST00000546556 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
CPM-203ENST00000546556 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
CPM-203ENST00000546556 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
CPM-203ENST00000546556 RGL2O15211 777 aa13.76□□□□□ -0.21
CPM-203ENST00000546556 GSE1Q14687 1217 aa13.76□□□□□ -0.21
CPM-203ENST00000546556 BBXQ8WY36 941 aaPredicted RBP13.75□□□□□ -0.21
CPM-203ENST00000546556 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
CPM-203ENST00000546556 NISCHQ9Y2I1 1504 aa13.74□□□□□ -0.21
CPM-203ENST00000546556 NUBP1P53384 320 aa13.73□□□□□ -0.21
CPM-203ENST00000546556 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.71□□□□□ -0.21
CPM-203ENST00000546556 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
CPM-203ENST00000546556 NPM1P06748 294 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPM-203ENST00000546556 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
CPM-203ENST00000546556 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
CPM-203ENST00000546556 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
CPM-203ENST00000546556 FAM212AQ96EL1 285 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms