Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.75■□□□□ 0.43
CCM2LQ9NUG4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCM2LQ9NUG4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 YBX1P10-201ENST00000444752 975 ntBASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 AC069544.1-201ENST00000609399 999 ntBASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCM2LQ9NUG4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.72■□□□□ 0.43
CCM2LQ9NUG4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms