Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC008764.6-201ENST00000595909 2069 ntBASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 AC135776.1-201ENST00000319817 2481 ntBASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 KRT17P3-201ENST00000420566 1262 ntBASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 PRSS44-201ENST00000515154 1146 ntBASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 KRT8P11-201ENST00000409686 1436 ntBASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 AP000997.3-201ENST00000623333 2250 ntBASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.86□□□□□ -0.35
CDC42SE2Q9NRR3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 AC142086.2-201ENST00000569753 217 ntBASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 AC008403.3-201ENST00000598924 454 ntBASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 MTDHP1-201ENST00000605323 784 ntBASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 KRT8P45-201ENST00000414328 1447 ntBASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 AL357033.4-201ENST00000617703 1807 ntBASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CDC42SE2Q9NRR3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms