Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL109659.2-201ENST00000606809 1674 ntBASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM7Q9NR12 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 AL391807.1-203ENST00000604392 2365 ntBASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 TSPY12P-201ENST00000421279 868 ntBASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 KRT16P4-201ENST00000453883 522 ntBASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM7Q9NR12 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 HLA-A-201ENST00000376802 1334 ntBASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 BX640515.1-201ENST00000617215 977 ntBASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 AC068587.9-201ENST00000641814 219 ntBASIC20.83■□□□□ 0.93
PDLIM7Q9NR12 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 RCC2P3-201ENST00000418112 1537 ntBASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.83■□□□□ 0.92
PDLIM7Q9NR12 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM7Q9NR12 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDLIM7Q9NR12 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms