Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 AC106881.1-201ENST00000605849 3329 ntBASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 AC023908.3-201ENST00000564211 3047 ntBASIC10.82□□□□□ -0.68
CYSTM1Q9H1C7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 ZNRF2P1-201ENST00000441407 443 ntBASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CYSTM1Q9H1C7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms