Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 THEM4-205ENST00000489410 643 ntTSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 AC007326.2-201ENST00000624224 7579 ntBASIC11.11□□□□□ -0.63
LIMD2Q9BT23 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LIMD2Q9BT23 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 AC141586.3-201ENST00000562166 1838 ntBASIC11.1□□□□□ -0.63
LIMD2Q9BT23 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 TSPY21P-201ENST00000433481 731 ntBASIC11.1□□□□□ -0.63
LIMD2Q9BT23 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 C1QL1P1-201ENST00000568105 661 ntBASIC11.1□□□□□ -0.63
LIMD2Q9BT23 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LIMD2Q9BT23 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms