Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE1Q99829 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE1Q99829 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE1Q99829 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE1Q99829 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 FAM207BP-201ENST00000447172 505 ntBASIC18.66■□□□□ 0.58
CPNE1Q99829 AC128676.1-201ENST00000454392 318 ntBASIC18.66■□□□□ 0.58
CPNE1Q99829 AC130371.2-201ENST00000619443 611 ntBASIC18.66■□□□□ 0.58
CPNE1Q99829 AC005332.8-201ENST00000622750 2735 ntBASIC18.66■□□□□ 0.58
CPNE1Q99829 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE1Q99829 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CPNE1Q99829 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CPNE1Q99829 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CPNE1Q99829 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CPNE1Q99829 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE1Q99829 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE1Q99829 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE1Q99829 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE1Q99829 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE1Q99829 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE1Q99829 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 AC008040.2-201ENST00000461049 708 ntBASIC18.65■□□□□ 0.58
CPNE1Q99829 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE1Q99829 C1QBPP2-201ENST00000528754 825 ntBASIC18.65■□□□□ 0.58
CPNE1Q99829 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.65■□□□□ 0.58
CPNE1Q99829 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CPNE1Q99829 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE1Q99829 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CPNE1Q99829 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE1Q99829 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.64■□□□□ 0.58
CPNE1Q99829 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CPNE1Q99829 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPNE1Q99829 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPNE1Q99829 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CPNE1Q99829 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE1Q99829 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE1Q99829 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE1Q99829 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CPNE1Q99829 RARRES2P10-201ENST00000564312 460 ntBASIC18.64■□□□□ 0.57
CPNE1Q99829 AF186192.3-201ENST00000583427 947 ntBASIC18.64■□□□□ 0.57
CPNE1Q99829 AC073195.1-201ENST00000607241 877 ntBASIC18.64■□□□□ 0.57
CPNE1Q99829 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE1Q99829 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CPNE1Q99829 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.64■□□□□ 0.57
CPNE1Q99829 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE1Q99829 AC135776.1-201ENST00000319817 2481 ntBASIC18.64■□□□□ 0.57
CPNE1Q99829 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE1Q99829 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.64■□□□□ 0.57
CPNE1Q99829 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPNE1Q99829 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CPNE1Q99829 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.63■□□□□ 0.57
CPNE1Q99829 KRT18P41-201ENST00000518924 1277 ntBASIC18.63■□□□□ 0.57
CPNE1Q99829 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.63■□□□□ 0.57
CPNE1Q99829 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CPNE1Q99829 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CPNE1Q99829 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.63■□□□□ 0.57
CPNE1Q99829 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPNE1Q99829 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms