Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
COPS9Q8WXC6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
COPS9Q8WXC6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 AC018553.1-201ENST00000616682 1458 ntBASIC12.6□□□□□ -0.39
COPS9Q8WXC6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 GAS2L1P2-201ENST00000436355 1356 ntBASIC12.6□□□□□ -0.39
COPS9Q8WXC6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.6□□□□□ -0.39
COPS9Q8WXC6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 AC008764.7-201ENST00000593779 1081 ntBASIC12.6□□□□□ -0.39
COPS9Q8WXC6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COPS9Q8WXC6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 AC009053.2-201ENST00000563701 2365 ntBASIC12.59□□□□□ -0.39
COPS9Q8WXC6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COPS9Q8WXC6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms