Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 AC135050.7-201ENST00000624508 2218 ntBASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 MESTP1-201ENST00000404287 994 ntBASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LINC00346Q8IVM7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 AL390961.4-201ENST00000623958 2535 ntBASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 RCC2P3-201ENST00000418112 1537 ntBASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 GCSHP5-201ENST00000443090 522 ntBASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.52■□□□□ 0.24
LINC00346Q8IVM7 FSCN1P1-201ENST00000568912 1481 ntBASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 AL135905.2-201ENST00000584934 1404 ntBASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC00346Q8IVM7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC00346Q8IVM7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 AL357033.4-201ENST00000617703 1807 ntBASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC00346Q8IVM7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms