Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.63■□□□□ 0.57
LDB1Q86U70 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
LDB1Q86U70 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.63■□□□□ 0.57
LDB1Q86U70 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 AC099343.3-201ENST00000605834 2503 ntBASIC18.62■□□□□ 0.57
LDB1Q86U70 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LDB1Q86U70 AL596275.1-201ENST00000423464 877 ntBASIC18.62■□□□□ 0.57
LDB1Q86U70 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.62■□□□□ 0.57
LDB1Q86U70 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.62■□□□□ 0.57
LDB1Q86U70 AP005242.2-201ENST00000580065 1175 ntBASIC18.62■□□□□ 0.57
LDB1Q86U70 MIR4674-201ENST00000582457 87 ntBASIC18.62■□□□□ 0.57
LDB1Q86U70 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
LDB1Q86U70 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 AC066615.1-201ENST00000640911 628 ntBASIC18.62■□□□□ 0.57
LDB1Q86U70 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.62■□□□□ 0.57
LDB1Q86U70 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LDB1Q86U70 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
LDB1Q86U70 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDB1Q86U70 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.61■□□□□ 0.57
LDB1Q86U70 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LDB1Q86U70 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.61■□□□□ 0.57
LDB1Q86U70 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LDB1Q86U70 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.61■□□□□ 0.57
LDB1Q86U70 KRT8P9-201ENST00000558927 1449 ntBASIC18.61■□□□□ 0.57
LDB1Q86U70 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 KRT17P2-201ENST00000300992 1314 ntBASIC18.61■□□□□ 0.57
LDB1Q86U70 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.61■□□□□ 0.57
LDB1Q86U70 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
LDB1Q86U70 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.61■□□□□ 0.57
LDB1Q86U70 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.61■□□□□ 0.57
LDB1Q86U70 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.61■□□□□ 0.57
LDB1Q86U70 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDB1Q86U70 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
LDB1Q86U70 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LDB1Q86U70 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LDB1Q86U70 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LDB1Q86U70 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.6■□□□□ 0.57
LDB1Q86U70 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LDB1Q86U70 FITM1-202ENST00000559294 800 ntBASIC18.6■□□□□ 0.57
LDB1Q86U70 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
LDB1Q86U70 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LDB1Q86U70 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
LDB1Q86U70 AL109659.2-201ENST00000606809 1674 ntBASIC18.6■□□□□ 0.57
LDB1Q86U70 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.6■□□□□ 0.57
LDB1Q86U70 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDB1Q86U70 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDB1Q86U70 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms