Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 AC005363.2-201ENST00000618631 242 ntBASIC21.22■□□□□ 0.99
LONRF3Q496Y0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LONRF3Q496Y0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 CRYGFP-201ENST00000418459 633 ntBASIC21.21■□□□□ 0.99
LONRF3Q496Y0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 AL354751.1-201ENST00000412768 1863 ntBASIC21.21■□□□□ 0.99
LONRF3Q496Y0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.21■□□□□ 0.99
LONRF3Q496Y0 AIRN-201ENST00000601203 4374 ntBASIC21.2■□□□□ 0.99
LONRF3Q496Y0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LONRF3Q496Y0 KRT8P32-201ENST00000512863 1461 ntBASIC21.2■□□□□ 0.98
LONRF3Q496Y0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 AC097488.1-201ENST00000507834 756 ntBASIC21.19■□□□□ 0.98
LONRF3Q496Y0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 PRSS44-201ENST00000515154 1146 ntBASIC21.19■□□□□ 0.98
LONRF3Q496Y0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LONRF3Q496Y0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 AC073592.3-201ENST00000625118 1834 ntBASIC21.18■□□□□ 0.98
LONRF3Q496Y0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 SLC25A1P4-201ENST00000567977 778 ntBASIC21.18■□□□□ 0.98
LONRF3Q496Y0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms