Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.68■□□□□ 0.42
GABRA4P48169 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.68■□□□□ 0.42
GABRA4P48169 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
GABRA4P48169 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.68■□□□□ 0.42
GABRA4P48169 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.68■□□□□ 0.42
GABRA4P48169 AL136038.4-201ENST00000603606 1261 ntBASIC17.68■□□□□ 0.42
GABRA4P48169 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GABRA4P48169 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.68■□□□□ 0.42
GABRA4P48169 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.68■□□□□ 0.42
GABRA4P48169 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
GABRA4P48169 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.68■□□□□ 0.42
GABRA4P48169 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABRA4P48169 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.67■□□□□ 0.42
GABRA4P48169 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.67■□□□□ 0.42
GABRA4P48169 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GABRA4P48169 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABRA4P48169 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.67■□□□□ 0.42
GABRA4P48169 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.66■□□□□ 0.42
GABRA4P48169 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.66■□□□□ 0.42
GABRA4P48169 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
GABRA4P48169 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GABRA4P48169 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.66■□□□□ 0.42
GABRA4P48169 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
GABRA4P48169 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.66■□□□□ 0.42
GABRA4P48169 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GABRA4P48169 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABRA4P48169 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GABRA4P48169 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GABRA4P48169 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.65■□□□□ 0.42
GABRA4P48169 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 UPK3BP1-201ENST00000428678 509 ntBASIC17.65■□□□□ 0.42
GABRA4P48169 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.65■□□□□ 0.42
GABRA4P48169 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.65■□□□□ 0.42
GABRA4P48169 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GABRA4P48169 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GABRA4P48169 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.65■□□□□ 0.42
GABRA4P48169 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABRA4P48169 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
GABRA4P48169 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
GABRA4P48169 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.64■□□□□ 0.41
GABRA4P48169 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.64■□□□□ 0.41
GABRA4P48169 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms