Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RETP07949 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RETP07949 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.79■□□□□ 0.6
RETP07949 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RETP07949 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.79■□□□□ 0.6
RETP07949 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RETP07949 HLA-A-201ENST00000376802 1334 ntBASIC18.78■□□□□ 0.6
RETP07949 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.78■□□□□ 0.6
RETP07949 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.78■□□□□ 0.6
RETP07949 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 AP001271.2-201ENST00000624018 1556 ntBASIC18.78■□□□□ 0.6
RETP07949 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RETP07949 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 AL590627.1-203ENST00000421194 1026 ntBASIC18.78■□□□□ 0.6
RETP07949 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.78■□□□□ 0.6
RETP07949 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RETP07949 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.78■□□□□ 0.6
RETP07949 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RETP07949 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RETP07949 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.78■□□□□ 0.6
RETP07949 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RETP07949 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
RETP07949 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 HLA-F-220ENST00000434407 884 ntBASIC18.77■□□□□ 0.6
RETP07949 TOB2P1-201ENST00000469761 992 ntBASIC18.77■□□□□ 0.6
RETP07949 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.77■□□□□ 0.6
RETP07949 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RETP07949 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RETP07949 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RETP07949 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.77■□□□□ 0.59
RETP07949 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RETP07949 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RETP07949 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.76■□□□□ 0.59
RETP07949 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.76■□□□□ 0.59
RETP07949 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RETP07949 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 Z82202.1-201ENST00000623446 1880 ntBASIC18.76■□□□□ 0.59
RETP07949 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RETP07949 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.76■□□□□ 0.59
RETP07949 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 MIR662-201ENST00000384847 95 ntBASIC18.76■□□□□ 0.59
RETP07949 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
RETP07949 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.76■□□□□ 0.59
RETP07949 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RETP07949 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RETP07949 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.76■□□□□ 0.59
RETP07949 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.76■□□□□ 0.59
RETP07949 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RETP07949 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RETP07949 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.75■□□□□ 0.59
RETP07949 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RETP07949 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RETP07949 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RETP07949 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms