Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 AC133681.1-201ENST00000465482 601 ntBASIC14.62□□□□□ -0.07
TOMM40O96008 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 RCC2P6-201ENST00000526625 1557 ntBASIC14.62□□□□□ -0.07
TOMM40O96008 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.62□□□□□ -0.07
TOMM40O96008 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.62□□□□□ -0.07
TOMM40O96008 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.62□□□□□ -0.07
TOMM40O96008 AC124016.1-201ENST00000609552 612 ntBASIC14.62□□□□□ -0.07
TOMM40O96008 AC110285.5-201ENST00000611501 352 ntBASIC14.62□□□□□ -0.07
TOMM40O96008 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.62□□□□□ -0.07
TOMM40O96008 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.62□□□□□ -0.07
TOMM40O96008 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TOMM40O96008 AC073592.3-201ENST00000625118 1834 ntBASIC14.62□□□□□ -0.07
TOMM40O96008 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.61□□□□□ -0.07
TOMM40O96008 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TOMM40O96008 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TOMM40O96008 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TOMM40O96008 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 ESRRAP1-201ENST00000400596 1257 ntBASIC14.61□□□□□ -0.07
TOMM40O96008 NIFKP9-201ENST00000419265 221 ntBASIC14.61□□□□□ -0.07
TOMM40O96008 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.61□□□□□ -0.07
TOMM40O96008 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.61□□□□□ -0.07
TOMM40O96008 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.61□□□□□ -0.07
TOMM40O96008 KRT18P6-201ENST00000555540 1265 ntBASIC14.61□□□□□ -0.07
TOMM40O96008 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TOMM40O96008 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TOMM40O96008 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.61□□□□□ -0.07
TOMM40O96008 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TOMM40O96008 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TOMM40O96008 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 AC012313.1-201ENST00000593393 3059 ntBASIC14.6□□□□□ -0.07
TOMM40O96008 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 KRT8P11-201ENST00000409686 1436 ntBASIC14.6□□□□□ -0.07
TOMM40O96008 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TOMM40O96008 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TOMM40O96008 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.6□□□□□ -0.07
TOMM40O96008 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TOMM40O96008 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TOMM40O96008 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms